Limnobacter thiooxidans: RGQ30_03080
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Entry
RGQ30_03080 CDS
T09704
Symbol
rsmD
Name
(GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
lto
Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lto03009
]
RGQ30_03080 (rsmD)
Enzymes [BR:
lto01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
RGQ30_03080 (rsmD)
Ribosome biogenesis [BR:
lto03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RGQ30_03080 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
Methyltransf_31
Methyltransf_25
MTS
RsmJ
N6-adenineMlase
Methyltrans_SAM
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
BET24807
UniProt:
A0AA86MH79
LinkDB
All DBs
Position
344532..345137
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AA seq
201 aa
AA seq
DB search
MSKLRIVGGAWRRHQLPIAEVEGLRPTPDRVRETVFNWLGQDCTGMDVLDLYAGTGALGF
EAASRGAASVVLVEQHRKVLAQLQENRAYLLSKWPSDTGPVPQIQIDAADVLACVKRLAG
AGKRFDLVALDPPFRSELMQSTLALLPAVLKPGGLVYAEWHENLFDDEAALCKALGIEKL
DALRHLKAGQVHAHLFALPAL
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaaattgagaattgtgggtggtgcttggcgcaggcaccaattgcccattgccgag
gttgagggtttaaggccaacgccagaccgtgttcgggaaaccgtgttcaactggcttggg
caagattgcactggcatggatgtgcttgatttgtatgcaggcactggtgccttggggttc
gaagcggcatcgcggggtgccgccagcgtggtattggttgaacaacatcgcaaggtgctt
gcccaactgcaggaaaaccgcgcttacctgttgtcaaaatggccgtccgacacaggccct
gtaccccagatccagattgatgctgccgatgttctggcttgtgtgaaacgcttggccggt
gcgggcaaacgctttgacctggtggcgctggacccaccgtttcgaagtgaattgatgcaa
tccaccttggccttgttgcccgcggtgttgaagccaggtgggttggtttatgccgagtgg
catgaaaacctgttcgacgacgaagcagcgctgtgcaaagccttgggcattgagaaactt
gatgcattgcggcatttaaaagcaggccaagtgcatgcgcatttgttcgccctgcctgct
ctgtga
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