KEGG   Limnobacter thiooxidans: RGQ30_06870
Entry
RGQ30_06870       CDS       T09704                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
lto  Limnobacter thiooxidans
Pathway
lto00740  Riboflavin metabolism
lto01100  Metabolic pathways
lto01110  Biosynthesis of secondary metabolites
lto01240  Biosynthesis of cofactors
lto02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:lto00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    RGQ30_06870 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RGQ30_06870 (ribD)
Enzymes [BR:lto01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     RGQ30_06870 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     RGQ30_06870 (ribD)
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: BET25186
UniProt: A0AA86IZQ5
LinkDB
Position
complement(771216..772349)
AA seq 377 aa
MGTPHPNDEHWMRHALNLAWKGQYSTTPNPRVGCVFVRDGVAIAEGFHVRAGEGHAEVQA
IAQARAQGVSLQGSTAYVTLEPCAHHGRTGPCAEALVATGVARVVAAVLDPNPLVAGKGM
AILRAAGIETVQGVLVEQARWINRGFFSRMERKRPWVRLKVASSADGVTALNNSTSQWIT
GPEARLDGHHLRAQACAVLSGIGTVKADNPQLNVRGIETDRQPLKVIVDSKLEISPDALL
LQTGRVLIAHTEPQLPAWLSTHPNAANIEALNVAPVAAGLHAGKVKTDLLRLLQELARRG
INELHLEAGFGLNGSFMQAGLVDEVVQYVAPRFLGAGLGLFRLPEQETLPATLDWAIHSF
EQKGRDLLIVWVRNNQE
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgggtactccacaccccaacgatgaacactggatgcgccatgcattgaacctggcctgg
aaaggccagtacagcaccacacccaatccgcgtgtgggttgcgtgtttgtgcgcgatggt
gttgccattgcagaaggcttccatgttcgtgccggtgagggccatgccgaggtgcaagcc
attgcccaagcccgtgcacaaggcgtgtcgcttcagggcagcacggcctatgtcaccttg
gagccctgtgcccaccatggccgcaccggaccgtgtgccgaggccctggtggcaaccggc
gtcgcccgcgtggtggccgcagtactcgaccccaaccctttggttgcaggcaaaggcatg
gcgatactgagggccgcaggaattgaaacggtacaaggtgtgctggttgaacaggcacgc
tggatcaaccgcggctttttcagccgcatggagcgcaagcgcccttgggtacgcctgaaa
gtagccagcagtgcggatggcgtcaccgcgctgaacaacagcacaagccaatggatcact
ggccccgaagcacggctggacggacatcacctgcgcgcccaagcctgcgcggtgctcagt
ggtatcggcacggtaaaggcagacaacccgcaactgaatgtgcgtggcatagagacagac
cgccaaccactgaaagtgattgtggacagcaaactggaaatttcacccgatgcgctgttg
ctgcaaacaggtcgggtgctgattgcgcacacagagccacaattgccggcttggctgagc
acccaccccaatgcagccaacatcgaggcgctcaatgttgcgccggtcgcggcaggcctg
catgctggcaaggtaaaaacagacctgctccgcctgctgcaggagttggcgcggcgcggc
atcaatgaactgcaccttgaagcaggttttggcctaaacggatcattcatgcaagccggg
ctggtggatgaagttgtgcagtacgtggccccccgcttcctcggtgcaggccttggcctg
tttcgtctgcctgaacaagaaactttgccggccacccttgactgggcaatccattcattt
gaacaaaaaggacgagacctgctcattgtgtgggtccgcaacaatcaggagtag

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