Limnobacter thiooxidans: RGQ30_11050
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Entry
RGQ30_11050 CDS
T09704
Symbol
ppk1
Name
(GenBank) polyphosphate kinase 1
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
lto
Limnobacter thiooxidans
Pathway
lto00190
Oxidative phosphorylation
lto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
RGQ30_11050 (ppk1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RGQ30_11050 (ppk1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lto03019
]
RGQ30_11050 (ppk1)
Enzymes [BR:
lto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
RGQ30_11050 (ppk1)
Messenger RNA biogenesis [BR:
lto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RGQ30_11050 (ppk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
BET25604
UniProt:
A0AA86M8B9
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All DBs
Position
1218914..1221052
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AA seq
712 aa
AA seq
DB search
MKVAAVLDVAPNKDLYLNRELGVLAFNRRVLAMAEDESVPLLERLKYLCIVSSNMDEFFE
IRVSGLQEQIRQNPDFRDKDGLSALETLHRVSAVSQEIVELQYRLFNDSVLPAMREQGIA
LMTLATWNEEQAHWARQYFRNEVLPVLTPIGLDPAHPFPRVLNKSLNFAVELTGHDAFGR
ASNVAIVQAPRALPRLIRMPSNLSGYEHGFVMLTSILQAFIPELFPGMEVHGVYQFRVTR
NSDLYVDEEEITNLRVALQGELSQRHFGDAVRLEVSDQTSPDMTARLLKEFGLPEQALYR
VNGPVNLVRLMQLPDWVDRPDLKFTPFTPGLPDALAKQSDIFKAIQKGDVLLHHPYQSFS
PVLEFIKRAATDPEVVAIKQTIYRTGTESVLMESLLAAARSGKEVTVVLELMARFDEEAN
INWASKLERVGAHVVYGVVGQKTHAKMLMVVRREKTETGKVVLRRYVHLGTGNYHPKTAR
LYTDFGLFSCDEALGQDVHEVFNHLTGLGRARKLNKIWNSPFNLHSNVVQSVRKEAELAR
AGKKCRIMARMNALLEPHLINELYAASQAGVKIDLIVRGVCALRPGVAGLSDNITVRSVV
GRLLEHSRVFYFSNDGEEEVFISSADWMDRNFFRRVELAVPITDKKLKKRVIDEGLKALL
ADNILAWVMDAQGNYTRKKPTGARRVNSQVYLLSSLSTNFSGQNEPTSTSLP
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagttgccgctgtcctcgacgttgcacccaacaaagacctgtacctgaacagggaa
ctgggcgtattggcttttaaccgccgcgtgctggccatggccgaggatgaaagcgtacct
ttgctggaacggcttaaatacctgtgtattgtgtccagcaacatggatgagtttttcgaa
attcgtgtgtcgggtctgcaggagcaaattcgtcaaaatcccgatttcagggacaaggac
ggattgagtgcacttgaaactctccaccgggtttcagctgtatcccaggaaattgtggaa
cttcagtatcgccttttcaatgattccgtattgcctgccatgcgggagcagggcattgca
ctaatgaccctggccacctggaatgaagagcaggcgcattgggcgcggcagtacttccgc
aatgaagtgctgcctgtgctgacaccgattggcctggaccccgcacatccgttcccccgc
gtgttgaacaagtcactgaacttcgcagtggagttgactggtcacgatgcgtttggtcga
gcatccaatgtggccattgtgcaggccccacgcgcattgccacgcctgatccggatgcca
tccaacctgtcgggctatgaacatggcttcgtcatgttgacctctattctgcaagccttc
attcccgagttgtttcccggcatggaagtgcatggtgtgtaccagttccgggtcacacgc
aacagcgacctgtatgtggatgaggaggaaatcaccaacttgcgtgtggctttgcaaggt
gaattgtcgcaacggcatttcggtgatgcagttcgcctggaggtgtctgaccaaacgtcg
cctgacatgacagcgcgtttgcttaaggaattcggcttgcccgagcaggcgctgtaccgc
gtaaacggcccagtcaacctggtgcgtttgatgcaattgccggattgggtcgaccgcccg
gacctgaagttcacgccgtttacgccgggcctgccagacgcattggccaaacagtccgac
atcttcaaggccattcaaaaaggcgatgtgctgttgcatcacccttaccaaagtttcagc
ccggtgcttgagttcatcaaacgggcggcaactgatccggaggtggtagccatcaagcaa
accatttaccgcacaggtactgaatcggtgctgatggaaagcctgcttgcagcagcacgc
agcggcaaggaagtgaccgtggtgcttgagttgatggcgcggtttgacgaagaggccaac
atcaactgggcttcgaagctggaacgtgttggggcccacgtggtgtacggtgtagtgggg
cagaaaacccacgcaaaaatgctgatggttgttcgccgggagaaaacggaaacaggcaag
gtggtgcttcgccgttatgtgcacctaggtacaggcaactaccacccgaaaaccgcgcgt
ttgtacaccgactttggtttgttctcctgtgatgaagcgctggggcaggatgtgcacgag
gttttcaatcaccttaccggccttggtcgtgcacgcaagttgaacaagatctggaattca
ccgttcaatcttcacagcaacgtggtgcagtcggttcgcaaggaagcggagctggccagg
gctggcaagaagtgccgcatcatggcgcgcatgaacgccttgcttgaaccgcatttgatc
aatgagctttatgccgcttcgcaagcgggtgtgaaaattgacctgattgttcgaggcgtg
tgtgccttgcgccctggtgtggcaggcctgagcgacaacatcactgtgcggtcagtggtg
gggcgtttgctggaacacagccgggtattttatttcagcaacgatggtgaagaagaggtg
ttcatttccagcgccgactggatggaccgaaacttcttccgccgtgttgaactggccgtt
cccatcaccgataaaaagctgaaaaagcgtgtgattgacgagggtttgaaagccttgctg
gcggacaacattctggcttgggtgatggatgcgcaaggaaactacacccgtaaaaagccg
accggcgcacgccgggtgaattcgcaggtttacctgttgagttctttgtctaccaacttc
agcggacagaacgaacccacttcaaccagtcttccctga
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