Lachnoanaerobaculum umeaense: D4A81_05755
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Entry
D4A81_05755 CDS
T05639
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
lua
Lachnoanaerobaculum umeaense
Pathway
lua00190
Oxidative phosphorylation
lua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lua00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
D4A81_05755
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D4A81_05755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lua03019
]
D4A81_05755
Enzymes [BR:
lua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
D4A81_05755
Messenger RNA biogenesis [BR:
lua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
D4A81_05755
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
AYA99481
UniProt:
A0A385PZ84
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All DBs
Position
1269214..1271382
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AA seq
722 aa
AA seq
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MEKFDNVEYFTNRELSWLKFNIRVLNEAEDDDVKLFERLKFLSITSSNLDEFFMVRIASL
KDMVEADYKKKDISGMSADKQLNLLAKETHNFVKKQYEIYNKSLLPLLKKENLYIISHDD
LLEAHEKKFISEYFDEFVYPVLTPMAVDASRPFPLVRNKTLNIAALIRKRKDESSKKKKK
DVYLGNVDGDMDFAMVQVPSVLPRIVEIPSESDERKIIYLEDIIEKNIDKLFLNYEVISA
ATFRVMRNAEFKLDEDEALDLLEEIKKKLKKRQWGEAIRLEVEERMDTSLLQFLKSELNI
EEEDIFRINGPLDLTAMMKIYSLDGFDRLKDKKHIPVMNSRLVDCEDIFDEIKKKDILLS
HPYESFDPVIEFVSKAAADKNVLAIKQTLYRVSGNSPIIIALANAADNGKQVTVLVELKA
RFDEENNINWARMLEKAGCHVIYGLVGLKTHSKITLVVRREEDGIRRYVHLGTGNYNDST
AKLYTDLGMFTARESYGEDATAVFNMLSGYSEPPFWKRFVVAPLWMKDIFLRKISKCEEA
AKAGSDVRIIAKMNSLSDKDIICALYAASCAGVKIDLIVRGICCLKVGIKGVSENITVRS
IVGTFLEHARIFDFRIDNDEEIFLGSADWMNRNLEKRVEIVFPVADEDIIKSIRHYLDVE
LEDNVKASILLPDNSYEKVKRAGNAKKNSQAIFIKEANQIYDAAIKVNKIEDNRTFVPLQ
GE
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagtttgacaatgtagaatactttaccaacagggaactttcctggctaaaattc
aatataagagtattgaatgaggcggaggatgatgatgtaaaactttttgagagattgaaa
tttcttagtattacatcatcaaatttggatgaattttttatggtaagaattgcttctcta
aaggatatggtggaggcagactataagaaaaaagatatttccggaatgagtgccgataag
cagttaaatttattagcaaaagagacacacaattttgtaaaaaaacagtatgaaatttat
aataaatctctgcttcctttgttaaaaaaggaaaatttatatataataagccatgatgat
ttattggaagcacatgaaaagaaatttataagtgaatactttgatgagtttgtatatccg
gtacttactccgatggcagtggatgcatccagaccttttccattagtacgaaacaagaca
ttaaatatagcagcacttataaggaaaaggaaagacgagagttcaaagaaaaagaaaaaa
gatgtatatcttggaaatgttgatggagatatggattttgcaatggtacaggtgccgtca
gtacttccaagaatagtagagattccaagtgagtcagatgaaagaaagataatatatctc
gaagatattatagaaaaaaatattgataagctattcttaaactatgaagtgatttctgct
gcaacctttagagtaatgagaaatgctgaatttaagctagacgaagatgaagcactggat
cttttagaggaaataaagaaaaaacttaagaaaaggcagtggggtgaggccatcagactt
gaggttgaggagagaatggacaccagccttttacaattcttgaaaagtgagcttaatatt
gaagaagaggatatttttagaataaatggtccccttgatcttacagcgatgatgaaaata
tattctctggacggttttgacagattaaaggataaaaagcatattcctgtaatgaattca
agacttgtagattgtgaggatatttttgatgaaataaaaaagaaggatatattactttca
catccatatgaaagttttgatccggtaatagaatttgtgtcaaaagcagctgctgacaaa
aatgtactagctattaagcagactttgtatagagtaagtggaaattctcctataataata
gcacttgcaaacgctgccgataatggtaagcaagttacagttttagtggaacttaaggca
agatttgatgaggagaataatattaactgggctagaatgcttgaaaaggcaggttgtcat
gtaatctatggattggttggattaaagactcactcaaaaataactttggtagtaaggaga
gaagaggacggtattagaagatatgtacatcttggtacaggaaattataatgattctaca
gcaaaactttataccgatttgggtatgttcacagccagagaaagctatggtgaagatgct
acagcagtctttaatatgttaagtggatattctgaacctccattttggaagagatttgta
gtagcacctctttggatgaaggatatattcttaagaaagataagcaaatgtgaggaggca
gcaaaggccggatcagatgttagaataattgcaaaaatgaattcactttcggataaggat
attatatgtgccctatatgctgcaagttgtgcaggtgtaaagatagacttgatagttaga
ggcatctgttgtttgaaagttggaataaagggagtatctgagaatattacagttagatct
atagttggaacattcttagagcatgccagaatatttgattttcgtatagataatgatgag
gagatcttccttggcagtgctgattggatgaacagaaatcttgaaaagagagtggagata
gttttcccggtagcggatgaggatataataaagagcataagacattatctggatgttgag
cttgaagataatgtaaaggcgtctatactcttacctgacaatagttatgagaaggtgaag
agagccggaaatgcaaagaaaaactcacaagcaatctttattaaagaggcaaatcagata
tatgatgccgctataaaagtaaataaaatagaagataataggacctttgtaccattacaa
ggggaatag
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