Lysobacter oculi: DCD74_03265
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Entry
DCD74_03265 CDS
T05527
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lue
Lysobacter oculi
Brite
KEGG Orthology (KO) [BR:
lue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lue03009
]
DCD74_03265
Enzymes [BR:
lue01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DCD74_03265
Ribosome biogenesis [BR:
lue03009
]
Prokaryotic type
ribosomal protein modification factors
DCD74_03265
BRITE hierarchy
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GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AXA83837
UniProt:
A0A344J477
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Position
672580..673911
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AA seq
443 aa
AA seq
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MSRAQPKVGFVSLGCPKALVDSERILTQLKVEGYDLVPSYDDADVVVVNTCGFIDSAVAE
SLDAIGEAMAENGKVIVTGCLGKRADVIREAHPGVLSISGPQDYASVMEAVHVALPPKHD
PFIDLVPDYGLKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVGEVLREAEKLAM
GGVKELLVVSQDTSAYGVDVKYAAREWHGKSYATRMKALCEGLSELGLWTRLHYVYPYPH
VDDIIPLMAEGKILPYLDIPFQHASPRILKLMKRPGAIDKTRERIARWRDICPDITIRST
FIVGFPGETDAEFEGLLDFIEDVRLDRVGAFAYSPVQGAAANELPGAVPEEVQQERLARF
MALQAQISEEKLAAKVGTTQRCLVDAMDGELAIARSMADAPEIDGLVQIQDGRDAGLVPG
EFVDVEIMGSDEHDLYGEVAYAD
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgagcccagcccaaggtcggtttcgtcagcctcggttgccccaaggcgctggtc
gattccgagcgcatcctcacccagctcaaggtggagggctacgacttggtgcccagctac
gacgatgccgatgtggtcgtcgtcaacacctgtggcttcatcgacagcgcggtggccgag
tcgctcgacgccatcggcgaggcgatggccgagaacggcaaggtgatcgtgaccggctgc
ctgggcaagcgcgccgacgtgatccgcgaggcgcacccgggcgtgctctctatcagcggc
ccgcaggactacgccagcgtgatggaagccgtgcacgtggcgctgccgcccaagcacgac
ccgttcatcgacctggtgccggattacggcctgaagctgacgccgaagcactacgcctat
ctcaagatttccgaaggctgcaaccatcgctgcagcttctgcatcattccctcgatgcgt
ggcgacctggtgtcgcggccggtgggcgaagtgctgcgcgaagccgaaaagctggcgatg
ggcggcgtcaaggaactgctggtggtctcgcaggacaccagtgcctacggcgtggacgtg
aagtacgccgcgcgcgaatggcatggcaagtcctacgccacgcggatgaaggcgctgtgc
gaaggcctgtccgaactcgggctgtggacgcgcctgcactacgtctacccgtacccgcac
gtggacgacatcatcccgttgatggcggagggtaagatccttccctatctcgacatcccg
ttccagcacgccagcccgcgcatcctgaaattgatgaagcggcccggcgccatcgacaag
acccgcgagcgcatcgcccgctggcgcgacatctgcccggacatcaccatccgcagcacc
ttcatcgtcgggtttcccggcgagaccgacgcggagttcgaggggctgctcgatttcatc
gaagacgtgcggctggaccgcgtcggtgccttcgcctattcgccggtgcagggcgcggcg
gcgaatgaattgccgggtgcagtgccggaagaagtgcagcaggaacgcctcgcgcgcttc
atggccctgcaggcgcagatttccgaagaaaagctggcggcgaaggtcggcaccacccag
cgttgcctggtggatgcgatggatggcgagctggccattgctcggtcgatggccgatgcg
ccggagatcgacggcctggtgcagatccaggatggccgcgatgccggactggtgccgggc
gagtttgtcgatgtcgagatcatgggcagcgacgaacacgacctctacggtgaagtcgcc
tacgccgactga
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