Lysobacter oculi: DCD74_10380
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Entry
DCD74_10380 CDS
T05527
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lue
Lysobacter oculi
Pathway
lue03030
DNA replication
lue03410
Base excision repair
lue03420
Nucleotide excision repair
lue03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DCD74_10380
03410 Base excision repair
DCD74_10380
03420 Nucleotide excision repair
DCD74_10380
03440 Homologous recombination
DCD74_10380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lue03032
]
DCD74_10380
03400 DNA repair and recombination proteins [BR:
lue03400
]
DCD74_10380
Enzymes [BR:
lue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DCD74_10380
DNA replication proteins [BR:
lue03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DCD74_10380
DNA repair and recombination proteins [BR:
lue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DCD74_10380
NER (nucleotide excision repair)
GGR (global genome repair) factors
DCD74_10380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AXA85031
UniProt:
A0A344J7M1
LinkDB
All DBs
Position
complement(2149892..2152651)
Genome browser
AA seq
919 aa
AA seq
DB search
MKKLVLIDGSSYLYRAFHALPPLTNAAGEPTGALFGVVNMLRAHLKEAPDYIAFVMDASG
PTFRDDIDPEYKANRPPMPDDLRAQVEPLMAIVSALGLPILRESGVEADDVIGTLALAAA
NAGVDVVVSTGDKDMAQLVRERVSLVNTMSGSHLDSDEAVIEKFGVPPSRIVDYLSLVGD
KVDNIPGVDKCGPKTAAKWLGEYGSLDGVIEHADAIKGKVGDNLRAVLQRLPLNRELATI
RTDLALPQGYDALAMRARDTDALRTLYARYGFNQALKELDGGAVGEGLFDAKTPAPARGF
VAAPVVEGGHDLDPALAVPGEYETVLSREQLDAWIARLDAAPRFAFDTETDSLDPMRANL
VGLSLCVETGHACYIPLAHDYPGVPAQLPMDDVLEALRPALTDPAKGKIGQHGKYDLHVM
RRHGIDVQGYADDTMLQSFVLDSSQRHDMDSQAKRLLGIDTIPYSAVAGKGAKQIPFAAV
ALDDATRYAAEDADITLRLDRVQQPRLAAEPGLEGIYRDIEMPLVPVLERIEANGVLIDA
DELRRQSADLGKRMLAAQQQATELAGRTLNLDSPKQLGALLFDELKLPALVKTPGGAPST
NEEALEAIADLHELPRVILEYRGLAKLRSTYTDKLPEMVNPDTGRVHTSYHQAGAATGRL
ASSDPNLQNIPIRTPDGRRIRRAFIAPPGRKLVACDYSQIELRIMAHLSGDPALLAAFES
GADVHRATAAEVFGRPIDEVTPNERRAAKAINFGLMYGMSAFGLAKQLGIPRGEAQDYIA
LYFSRYPGVRDYMERTREQARGQGFVETVFGRRLYLPYIHSRNQGQRAGAERAAINAPMQ
GTAADIIKRAMISLDGWLAGHAARARMILQVHDELVFEADEAFVPELMAEAKQRMSAAAE
LRVPLLVDGGIGENWDEAH
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaactcgtgctgatcgacggctcctcctatctttaccgcgccttccacgcgctg
ccgccgctgaccaatgcggccggcgaaccgaccggcgccttgttcggcgtggtcaacatg
ctgcgcgcgcacctgaaggaagcgccggattacatcgccttcgtgatggacgccagcggg
cccaccttccgcgacgacatcgaccccgaatacaaggccaaccgcccgccgatgcccgac
gacctgcgtgcgcaggtcgagccgctgatggcgatcgtgtccgcgctcggcctgccgatc
ctgcgcgaatccggcgtggaagccgacgatgtcatcggcacgctggcactggccgccgcc
aacgccggcgtggacgtggtggtatcgaccggcgacaaggacatggcgcagctggtgcgc
gagcgcgtcagcctggtcaacacgatgagcggcagccacctcgacagcgacgaggcggtg
atcgagaaattcggcgtgccgccttcgcgcatcgtcgattacctgtcgctggtcggcgac
aaggtcgacaacattcccggcgtcgacaaatgcgggcccaagaccgcggcgaaatggctg
ggcgaatacggctcgctggatggcgtcatcgaacatgccgacgcgatcaagggcaaggtc
ggcgacaacctgcgagcggtattgcagcggctgccgttgaaccgcgagctggccacgatc
cgcaccgacctcgcgctgccgcagggctatgacgcattggcgatgcgcgcacgcgatacc
gatgctctgcgcacgctgtacgcgcgctacggtttcaaccaggcgctgaaggaactcgac
ggcggcgcggtgggcgaaggcctgttcgatgcgaagacgcctgcgcccgcgcgtggcttc
gtcgccgcgccggtggttgaaggcggccatgatctcgatcccgcgctggccgtgcccggc
gaatacgaaaccgtgctgagccgcgagcagctggatgcgtggatcgcgcggctcgatgcc
gccccgcgcttcgccttcgacaccgagaccgacagcctggatccgatgcgcgcgaacctg
gtcggcctgagcctgtgcgtggagaccggccacgcctgctacatcccgctggcgcacgac
tatccgggcgtgcccgcgcaattgccgatggatgacgtgctggaggcgctgcgccccgcc
ctgaccgatccggccaagggcaagatcgggcagcacggcaagtacgacctgcacgtgatg
cgccgccacggcatcgacgtgcagggctatgccgacgacaccatgctgcagagcttcgtg
ctggattccagccagcgccacgacatggattcgcaggcgaagcggctgctcggcatcgac
accattccctacagcgcggtggccggaaaaggcgcgaagcagatcccgttcgccgccgtc
gccctcgacgacgccacccgctacgccgccgaggacgccgacatcaccctgcgcctcgac
cgcgtgcaacaacccaggctggcggccgagccggggctggaaggcatctaccgcgacatc
gagatgccgctggtgccggtgctcgaacgcatcgaggccaacggcgtgctgatcgatgcc
gacgaactgcgccgccagtccgccgacctcggcaagcgcatgctcgctgcgcagcagcag
gcgaccgaactggccgggcgcacgctcaatctggattcgcccaagcagctcggtgcgctg
ctgttcgatgaactgaaactgccggcgttggtgaagacgccgggcggcgcgccatccacc
aacgaggaggcgctggaggcgatcgccgacctgcacgagctgccgcgggtgatcctggag
taccgcgggctggccaagctgcgcagcacctataccgacaagctgccggagatggtcaac
cccgataccggccgcgtgcacaccagctaccaccaggccggtgccgcgaccgggcggctg
gcgtcgagcgatcccaacctgcagaacatcccgatccgcacgccggacggccgccgcatc
cgccgcgccttcatcgcgccgccgggccgcaagctggtggcctgcgactactcgcagatc
gagctgcggatcatggcccacctgtcgggcgatccggcgctgctggcggcgttcgaatcc
ggcgccgacgtgcaccgcgcgaccgcggcggaagtgttcggccgccccatcgacgaggtc
acgccgaacgaacgccgcgccgccaaggcgatcaacttcggcctgatgtacggcatgagc
gcgttcgggctggccaagcagctcggcatcccgcgcggcgaggcgcaggactacatcgcg
ctgtatttcagccgctatccgggcgtgcgcgactacatggagcgcacccgcgaacaggcg
cgcgggcagggtttcgtcgaaacggtgttcggccgccgcctgtatctgccgtacatccac
tcgcgcaaccagggacagcgcgccggcgccgaacgcgcggcgatcaacgcgccgatgcag
ggcaccgccgccgacatcatcaagcgggcgatgatctcgctcgacggctggctggccggt
cacgccgcccgggcgcggatgatcctgcaggtccacgacgaactggtgttcgaggccgat
gaagccttcgtgccggagctgatggccgaggcgaaacaacggatgtcggccgccgccgaa
ctgcgcgtgccgctgctggtggacggcggcatcggagaaaactgggacgaggcgcactga
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