Lutibacter profundi: Lupro_03805
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Entry
Lupro_03805 CDS
T04235
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lut
Lutibacter profundi
Brite
KEGG Orthology (KO) [BR:
lut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lut03009
]
Lupro_03805
Enzymes [BR:
lut01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Lupro_03805
Ribosome biogenesis [BR:
lut03009
]
Prokaryotic type
ribosomal protein modification factors
Lupro_03805
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
TMF_TATA_bd
TRAM
Motif
Other DBs
NCBI-ProteinID:
AMC10428
UniProt:
A0A0X8G5J4
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Position
complement(864114..865424)
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AA seq
436 aa
AA seq
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MRTKSKKENKINVVTLGCSKNVYDSEVLMGQLKANNKNVVHEDENDEGNIVVINTCGFIG
DAKEESINTILHYVNKKELGEVDRVYVSGCLSERYKPDLQKEIPNVDEYFGTHDLPNLLK
VLEADYKHELIGERLTTTPTHYAYLKIAEGCDRPCSFCAIPLMRGKHVSTPIENLVIEAT
KLAKKGIKELILIAQDLTYYGLDIYKKRALADLLKELAKIDGIEWIRLHYAFPTGFPLDV
LEVIHNEPKVCNYLDIPLQHINDDILKSMRRGTSHEKTTNLIAEFRKSVPNMAIRTTLIV
GYPGETEENFQELKDWIQEMRFERLGAFAYSHEENTTAADLEDNVPEEVKQQRVNEIMDI
QSQISFELNQEKVDKIFKVLIDRKDGNQFVGRTEFDSPDVDNEVLIDATKHYVQVGKFAA
IKITSATEFDLYGEPA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccaaatcaaaaaaagaaaataaaataaatgttgttactttaggatgttctaaa
aatgtgtacgatagtgaagtacttatgggacagctaaaggcaaacaataaaaatgtggtt
catgaagatgaaaatgatgaaggtaatattgttgttataaatacctgtggttttattggt
gatgcgaaggaagaatccataaatactattttacattatgtaaacaaaaaggaattagga
gaagtagatagagtgtatgtttcaggttgtttaagcgaacgatataaaccagatttacaa
aaagaaataccaaatgttgatgagtattttggaactcacgatttaccaaatttattaaag
gttttagaggcagattacaagcatgaattaataggtgaacgtttaacaacaacacctaca
cactatgcgtatttaaaaattgctgaaggttgtgatcgtccttgttcattttgtgcaatt
cctttaatgcgtggtaagcacgtttcaactccaattgaaaatttagtgattgaagccact
aaattggctaaaaaaggaattaaagaactgattttaattgctcaagatttaacgtattac
ggattagatatctacaaaaaaagagccttagccgatttattaaaagaactagctaaaatt
gatggaattgaatggatacgtttacattatgcgtttccaacagggtttccgttagatgtt
ttggaggtgattcataatgaacctaaagtttgtaattatttagatattcctttacaacat
ataaatgatgatattttaaaatcaatgagaagaggaacttctcatgagaaaactactaat
ttaattgctgaatttagaaaatctgtgccaaatatggcaattagaacaacacttattgtt
ggttatccaggagaaacagaagaaaattttcaagaattaaaagattggatacaagaaatg
cgctttgaacgtttaggtgcttttgcctattctcatgaagaaaatactacggcagctgat
ttagaagataatgttcctgaagaggttaaacagcaacgtgttaatgaaataatggacatc
caaagtcagatttcttttgaattaaatcaagaaaaagttgataaaatatttaaagtttta
attgatagaaaagatgggaatcagtttgttggtaggacagaatttgattctcctgatgtg
gataacgaagtattgattgatgcaacaaaacattacgttcaagttggaaaatttgcagct
ataaaaattacttctgctactgaatttgatttatatggagaacctgcataa
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