Lipotes vexillifer (Yangtze River dolphin): 103073729
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Entry
103073729 CDS
T03090
Symbol
SPATA5L1
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1 isoform X1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lve03009
]
103073729 (SPATA5L1)
Enzymes [BR:
lve01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
103073729 (SPATA5L1)
Ribosome biogenesis [BR:
lve03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
103073729 (SPATA5L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_22
AAA_14
AAA_33
TIP49
Rad17
TsaE
AAA_28
AAA_18
nSTAND3
bpMoxR
NTPase_1
AAA_3
AAA_2
Viral_helicase1
Vps4_C
AAA_7
RNA_helicase
NACHT
DUF815
Zeta_toxin
IstB_IS21
AAA_17
AAA_11
AAA_25
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
103073729
NCBI-ProteinID:
XP_007467082
UniProt:
A0A340Y3X7
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MAPDSGSFPEGPLLKLLPVDARDRGTQRCRLGPAALRALGAHLGSAVEISLPDGGSCLCT
AWPRRDGADGFVQLDPQCASPGAAVGAPGSRGSLNLSRLRLVPCPPLRLLAVWPVLRELA
GVSGAPNPAAVLEAAQELLRNRPVSLGHVVAAPPGAPGPVAALHIVSGAPNPNPAGLVTP
RTHISLSGLPPSEEEPQPEVPLGGLSEAADSLRELLDLPLSYPRALASLGLEVPRGVLLA
GPPGVGKTQLVRAVARKAGAELLAVSAPTLQGSRPGETEENVRRVFQRAQELASRRPTLL
FLDEVDALCPRRGGPHRAPESRVVAQVLTLLDGISGGREVVVVGSTNRPDALDPALRRPG
RFDREIIIGTPTLRQRKAILQVITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAAMH
SLLHSEKNQDNPMIDETDFLEAFKKIQPSSFRSVIGLMDIKPVGWEQIGGLEDVKLKLKQ
SIEWPLKFPREFVRMGLTEPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPF
VGDSEKILSQVFRQARANTPAIVFLDEIDSILGSRSISRTGCNVQERVLSVLLNELDGVG
LKTIERRGSKSDQHGKYKELEKNEELEFQEVFNSNVMIVAATNRPDVLDDALLRPGRLDK
IIYIPPPDEKGRLSILKVCTKNMPMGPDISLENVAADTCFFSGADLGNLCKEAALLALQE
NGLEATTVKQEHFLESLKTVKPSLSHKDLTLYKNLFQKPGFSNLEDI
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggctccggactcaggttcctttccagaagggccactcttaaagctgctacccgtagac
gctagggaccggggcacccagcgctgtcgcctgggcccggcggccctccgcgccttaggc
gcgcacctgggctcggcggtggagatctcgctgcctgacggcggctcctgcctctgcacc
gcctggccgcggcgggatggagcggacggctttgtgcaactggatccgcagtgcgcgagc
ccgggggcggcagtgggggcgccggggtcccgggggagtctgaacctgagccgactccgg
ttagtgccctgcccgccccttcggctcctcgccgtgtggccggtgttgcgggagctggcg
ggcgtgtctggtgccccaaatccagccgcggtgctggaggcggcgcaggagctgctgagg
aaccgtccggtctctctgggccacgtggtggccgctcctccgggcgctcccggcccggtg
gccgccctgcacatcgtcagcggggcacccaacccgaatccggccgggctggtcacccct
cgcacccacatcagtctgagcgggctacctccgtcggaagaggagccgcagcccgaggtg
cccctggggggcctttccgaggcggccgactcgctgcgggagctcctcgacttgccgctc
agctacccccgcgccttggcctcgctggggctagaagtgccacgcggggtgctcctggct
ggtccccccggagtgggcaagacccagctagtgcgggccgtggcccgaaaggcgggcgcg
gagctgctggccgtgagtgcccccacgctgcagggctcccggcccggggagacggaggag
aacgtgcggcgggtcttccagcgcgcccaggagctggccagccgcaggcccacccttctc
ttcctggacgaggtggacgccctgtgtccccggcggggcggcccacaccgagcccctgag
agccgcgtggtggcccaggtgttgacgctgctagacggcatcagtgggggccgggaggtg
gtggttgtgggatccaccaaccggccggacgcgctagacccagcgctgcgcagacctggg
agattcgaccgagagattatcattgggactcccacacttagacaaagaaaggcgattcta
caagtgattacctcaaagatgcccatctccagtcaagtcgatttgagcctccttgcagaa
atgacggttggctatgttggtgcagacctgaccgcactctgtagggaggctgccatgcac
tctctgcttcatagtgagaagaaccaggacaatccaatgattgatgaaacagacttcctt
gaagcttttaaaaagatccagccctcatcatttcgaagtgtcattggacttatggacatc
aagcctgttggctgggagcagattggtggccttgaagatgtaaaactgaagttaaaacag
agcattgaatggcctctgaaattccctcgggaatttgttaggatgggcctgacagagcca
aagggagttctcctgtatggtccccctgggtgtgctaaaaccaccctggtgagggccctg
gccacgagctgtcattgctcttttgtttcagtgagcggagctgatctcttttcacctttt
gttggagattcagaaaaaatcttgtctcaggtatttcgacaagcaagagcaaatactcca
gcaattgtgtttttggatgaaattgattcaatcttgggctctcgatcaatcagcagaaca
ggatgtaatgttcaagaacgtgttctttctgttctcctaaatgaattagatggtgttgga
ttgaagactatagagagaagaggaagtaaatcagatcaacatggtaaatacaaggagctg
gaaaaaaacgaagagctagagtttcaggaagtttttaatagcaacgtcatgattgttgca
gcaacaaatagacctgatgtgttagatgatgccttgttacggcctggaagattagacaag
atcatttatattccacctccagatgaaaagggcaggctttctattctgaaagtctgtaca
aaaaacatgccaatggggcctgatatttccttagaaaatgtagcagcagatacctgtttt
ttctctggagctgatcttggaaacctctgcaaagaagccgccttgctggctctgcaagaa
aatggactggaagcgaccacagtgaaacaagagcactttctagaatcacttaagactgta
aaaccatccttaagtcacaaggatttgactttatataaaaacttatttcagaaaccagga
ttttctaacttagaagatatttaa
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