Lipotes vexillifer (Yangtze River dolphin): 103076132
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Entry
103076132 CDS
T03090
Symbol
BRIP1
Name
(RefSeq) LOW QUALITY PROTEIN: Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03440
Homologous recombination
lve03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103076132 (BRIP1)
03460 Fanconi anemia pathway
103076132 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lve03400
]
103076132 (BRIP1)
Enzymes [BR:
lve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
103076132 (BRIP1)
DNA repair and recombination proteins [BR:
lve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
103076132 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
103076132 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
103076132
NCBI-ProteinID:
XP_007464974
UniProt:
A0A340Y076
LinkDB
All DBs
Position
Unknown
AA seq
1241 aa
AA seq
DB search
MSSVCSEYTVGGVKINFPCKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSA
LAWQQSLSGKPVNEGLSKKAEVPLSCCCTCHSKNFTNSDVNQGTSYHFNSPSTPTSERNG
TLSTCQDSPEKTTLAAKLSAKKQASMYRDENDDFQVEKKRIRPLETAQQIRKRHCFEKEV
HHLDAKVASGKTTKLNSPLGKVNSFSPQNPSGNCSRCCCSTKQGNSQDSSNTTKKDHGGK
SKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCME
LLDGKNGKSCYFYHGVHKISDQHILQTLQGMCKAWDIEEFVSLGKKLKACPYYTARELMQ
DANIIFCPYNYLLDAQIRESMDINLKEQVVILDEAHNIEDCARESASYSVTEVQLRFARD
ELDSMVNSNIRKKDHEPLRAVCYSLINWLEANSEHLVERGYESSCKVWSGSEMLLNLHKM
GITTATFPILQGHFSAILQKEEKVSSVHGKEEAREVPIISASTQIMLKGLFMVLDYLFRQ
NSRFADDYKVAIQQTYSWINQTDTSDKNGFLVLPKNKKRLRQKTAVHVLNFWCLNPAVAF
SDINGKVWTIILTSGTLSPMTSFSSELGVTFTVQLEANHVINNSQVWVGTIGSGPKGRNL
CATFQHTETFEFQDEVGALVLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGVWHNLELV
KTVIVEPQRGEKTDFDELLQMYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVI
TIGIPFPNVKDLQVELKRQYNDQHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHRNDWG
ALILVDDRFRSNPSRYISGLSKWVRQLIQHHSTFESALESLAEFSKKHLKVIDVYKEDRK
SIQDNESTLEVACLKDNTSTYLLEAASHLSPEYPREGKVKXCIXELQCPKMIDKSPSLPR
GIISRKKNMKNDPLLLEESAQAVGAEKIVISRSTSPTFNKQTNRVSWSGSNFLEQYLTGK
ILTGTPKFRSSEDCASNSSTFKTEKGREAVLPLTDKYESSTLTVHTSLGPCPQSETIVPS
IKINATLLNPEDPDIQLSLVSEEAELSTSNTAFETEAEDESIYFTPELYDPIDINEEKNE
LVGTDRDNRLANNSNCILAEDLFEIKTMKGMDSVREMKAEDCTGTKLNRLMHIKESKVDD
IGSNVKTTHINELELGKNHEMDIKNFKQSPPKNKDVFPGVR
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagtatgttctgagtatacagttggtggggtgaagattaactttccttgtaaa
gcttatccatcacagcttgctatgatgaattctattgtcagaggattaaatagtaagcag
cattgtttgttggagagccccacagggagtgggaaaagcttagccttactttgctctgct
ttagcgtggcagcaatctcttagtgggaagccagtgaatgaaggcttaagtaaaaaagct
gaagtaccattgtcgtgttgttgtacatgtcattcaaagaattttacaaacagtgacgtg
aaccagggaacttcatatcatttcaacagtccaagtacaccaacttctgaaagaaatggc
actttgtcaacttgtcaagactctcctgaaaaaactacactggctgcaaagctatctgct
aagaaacaggcatccatgtacagagatgaaaatgatgattttcaagtagagaagaaaaga
attcgacccttagaaactgcacaacagattagaaaacgtcattgttttgaaaaggaggtg
caccatttggatgcaaaagttgcttcaggaaagaccacaaaactcaactccccattagga
aaggtaaactccttttctccacaaaatccctctggtaactgttctaggtgctgctgttct
actaaacaaggaaacagtcaagattcttcaaataccactaagaaggatcatggggggaaa
tccaagatacccaaaatatattttgggacacgcacacacaagcagattgctcagattact
agagagctccggaggacagcatactcaggggtcccaatgactattctttccagcagggat
cacacttgtgtccatcctgaagtagtaggtaacttcaacagaaatgaaaagtgcatggaa
ttgctagatggaaaaaatggaaaatcctgctatttttatcatggtgttcataaaattagt
gatcaacacatattacagactctccaagggatgtgcaaggcctgggatatagaagaattc
gtcagcttggggaaaaaactaaaggcatgtccatattacacagcacgagaactaatgcag
gatgctaacataatattttgtccctacaactatcttctagatgcacaaataagggaaagt
atggatatcaatctgaaagaacaggttgtcattttagatgaagctcataacattgaggac
tgtgctcgggaatcagcaagttacagtgtaacggaagttcagcttcggtttgctcgggat
gaactagatagtatggttaacagtaatataaggaagaaagaccatgaacccctacgagct
gtgtgctatagcctcattaattggttagaagcaaactctgaacatcttgtggaaaggggt
tatgaatcatcctgtaaagtatggagtggaagtgaaatgctgttaaatttacacaaaatg
ggcataaccactgctacttttcccattttgcagggacatttttctgctatccttcaaaaa
gaagaaaaagtctcatcagttcatggtaaagaggaggcaagagaagtacctattatcagt
gcttcaactcaaataatgctcaaaggactttttatggtgcttgactatctttttaggcaa
aatagcagatttgcagatgattataaagtcgctattcaacagacttactcttggataaat
cagactgatacttcagataaaaatgggttcttggttctaccaaaaaataagaaacgttta
cgacagaaaacagcagttcatgtgctgaatttttggtgcttaaatccagctgtggccttt
tcggatattaatggcaaggtttggacgattattttgacatctgggacattatcaccaatg
acatccttttcatcagaacttggtgttacatttactgtccaactggaggctaatcatgtc
attaataactcacaggtttgggttggtaccattgggtcaggccccaagggtcgcaatctc
tgtgctaccttccagcacacggaaacatttgagttccaggatgaagtgggagcacttgtg
ttatctgtgtgccagactgtgagccaaggaattttgtgtttcctgccatcttacaagtta
ctagaaaagttaaaagaacgttggctctccactggtgtatggcataatctggagttggtg
aagacagtcattgtagaaccgcagagaggagaaaaaactgattttgatgaattactgcag
atgtactatgatgcaatcaagtacaaaggagaaaaagatggcgccctcctggtggcagtt
tgtcgtggtaaagtgagtgagggtctggatttctcagatgacaacgcccgtgctgtcata
acaataggaattccttttccaaatgtgaaagatctacaggttgaactaaagcgacaatat
aatgaccagcattcaaaattaagaggtcttttaccaggtcgtcagtggtatgaaattcaa
gcatacagggccttaaaccaggccctaggtaggtgtattcgacacagaaatgattgggga
gctcttattctagtggatgatcgcttcaggagtaacccaagtcgatacatatctggactt
tctaagtgggttcggcagctgattcagcaccattcaacctttgagagtgcgctggagtcc
ttggctgaattttccaaaaagcacctaaaggtcattgatgtatacaaagaagacagaaaa
tctatacaggacaatgagtctacgcttgaagtggcttgtttgaaggataatacctcaact
tatttattagaagcagcaagccatctatcaccagaatatcctagggaaggtaaagtaaaa
nnatgtatctaagagctacagtgtcctaaaatgatagataaaagtccatctttaccaaga
ggcatcatctccagaaagaaaaatatgaaaaatgatccattattattggaagagtctgcc
caggcagtaggagcagaaaaaattgtgatttccagatccacaagcccaaccttcaacaaa
caaacaaacagagttagctggtctggcagtaattttctggaacagtatcttactggtaaa
attctgactggaacacctaagtttaggtcatcagaggactgtgcctctaattcttccact
ttcaaaacagaaaagggacgtgaagcagttttgccgctcactgataaatatgagtcctcc
actctgacagtacacacatcacttggaccgtgccctcaatcagaaaccattgttccatca
ataaagattaatgctactctcctgaatccagaagatccagacattcagttatctctagta
agtgaagaagctgaactttctacttcaaatacagcttttgaaacagaagcagaggatgaa
tctatctattttacacccgaactttatgatcccatagatataaatgaagaaaagaatgaa
ctagttggaactgatagagacaacagattggctaataattcaaattgcattttagctgaa
gatctttttgaaattaaaactatgaaaggaatggattcagtcagagaaatgaaagctgag
gattgcacaggcacaaagttgaatagactcatgcatattaaagaaagtaaagttgatgac
attggtagtaatgtaaaaacgactcatataaatgaattggaactgggaaaaaatcatgaa
atggatataaagaactttaaacagtctcctcccaaaaataaagatgtgttccctggtgtt
aggtaa
DBGET
integrated database retrieval system
