Lipotes vexillifer (Yangtze River dolphin): 103076461
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Entry
103076461 CDS
T03090
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve00310
Lysine degradation
lve01100
Metabolic pathways
lve04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
103076461 (SETDB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
103076461 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lve03036
]
103076461 (SETDB1)
Enzymes [BR:
lve01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
103076461 (SETDB1)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
103076461 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
103076461 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
MBD
Pre-SET
SET
DUF4537
Tudor_3
Tudor_2
Chromo
Motif
Other DBs
NCBI-GeneID:
103076461
NCBI-ProteinID:
XP_007460299
UniProt:
A0A340XM00
LinkDB
All DBs
Position
Unknown
AA seq
1288 aa
AA seq
DB search
MSSLPGCIGLDAATAAVESEEIAELQQAVVEELGISMEELRQFIDEELEKMDCIQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLVVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRYLVSFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASTLEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPVEPPQPTAPPAPPAPPGPPLSPQAGDSDLESQ
LAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENAPGGKPGISQTHRSPLGSTTSAPAP
PAPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRNEQYRGKNPLLV
PLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFCLDP
YVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTG
PEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINSNSGYQYKRLEECLPTGVYECN
KRCNCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFA
DKEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTEDPEESN
DDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSEMPSKDSRPPDVGPPRVPVPPS
IPVGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKTSEGGEGHAGGGRGEAE
KASTSGLGFKDEGDIKQPKKEDPDDRNKMSVVTESSRNYGYNPSPVKTEGLRRPPSKTSM
HQSRRLMASAQSNPDDILTLSSSTESEGESGTSRKPTAGQTSATAVDSDDIQTISSGSEG
DDFEDKKNMSGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGESAPVRKNTRQFYD
GEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKIRAGTELTW
DYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccctccctgggtgcattggtttggatgcagcaacagctgcagtggagtctgaa
gagattgcagagctgcaacaagcagtggttgaggagctgggtatctctatggaggaactt
cggcagttcattgatgaagaactggaaaagatggactgtatacagcagcgcaagaagcaa
ctagcagagttggagacatgggtaatacagaaggaatccgaggtagcccatgttgaccag
ctgtttgatgatgcatccagggcagtgactaattgtgagtctttggtgaaggacttttac
tccaaactgggactacagtaccgggacagtagttctgaagatgaagcttcccggcctaca
gaaataattgagattcctgatgaagacgatgatgtcctcagtattgattcaggtgatgct
gggagcagaactccaaaagaccagaagctccgtgaagctatggctgccttaagaaagtca
gctcaagatgtccagaagttcatggatgctgtcaacaagaagagcagttcccaggatcta
cacaaaggaaccttgagtcaaatgtctggagaattgagtaaagatggtgacctggtagtt
agcatgcgcattctgggcaagaagagaactaagacgtggcacaaaggcacccttattgcc
atccagacggttgggccaggaaagaagtacaaggtgaaatttgacaacaaaggaaagagt
cttctgtcagggaaccatattgcctatgattaccaccctcctgctgacaagctgtatgtg
ggcagtcgagtagtggccaaatacaaagatgggaatcaggtctggctctacgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtacctggtttcttttgatgatggc
tacgcttcctatgttacacagtctgaactgtatcccatttgccggccactgaaaaagact
tgggaggacatagaagacatctcctgccgagacttcatagaggagtatatcactgcttac
cccaaccgccccatggttttgctcaagagtggacagcttatcaagactgagtgggaaggc
acgtggtggaagtcccgagttgaggaggtggacggcagcctagtcaggatcctcttcctg
gatgacaaaagatgtgaatggatctatcgaggctctacacggctggagcccatgttcagc
atgaagacatcctcagcctctacactagagaagaagcaaggaggacagctcaggacacgt
ccaaatatgggtgctgtgaggagcaaaggtcctgtggtccagtacactcaggatctgacc
agtactggaacccagttcaagccagtggagccccctcagcctacagctccacctgcccca
cctgccccacctggtccacctctgtccccccaggcaggtgacagtgacttggaaagccag
cttgcccaatctcggaagcaggtagccaaaaaaagcacatccttccggccaggatctgtg
ggctctggtcattcctcccctacatcccctgcactcagtgaaaatgcccctggtgggaaa
cctgggatcagtcaaacacatagatcacctttaggatccacaacctctgccccagcaccc
ccagctcccccagcacctccagccttccatggcatgctggagcgggccccggcagagccc
tcctaccgcgcccccatggagaagcttttctacttacctcatgtctgcagctatacttgt
ctgtctcgagtcagacctatgagaaatgagcagtatcggggcaagaaccctctcctagtc
ccactactgtatgacttccggcggatgacagcccggcgccgagttaaccgcaagatgggc
tttcatgttatctataagacaccctgtggcctctgccttcggacaatgcaagagattgag
cgctacctttttgagacaggctgtgacttcctcttcctggagatgttctgtttggatcca
tatgttcttgtggaccgaaagtttcagccctataagcctttttactatattttggacatc
acctatgggaaggaagatgttcctctgtcctgtgtcaatgagattgacacaactccccca
cctcaggtggcctacagcaaggaacgaatcccgggcaagggtgttttcattaacacaggc
cctgaatttctggttggctgtgactgtaaagatgggtgccgggacaagtccaagtgtgcc
tgccatcagctaactatccaggctacagcctgcaccccaggcggccaaatcaactctaac
tctggctaccagtacaagagactagaagagtgtctgcccacaggagtttatgagtgtaac
aaacgctgcaattgtgacccaaacatgtgcacaaaccggttggtgcagcatggactgcag
gttcgactgcagctcttcaagacccagaacaagggctggggtatccgctgcttggatgac
attgccaaaggctcctttgtctgtatttatgcaggcaaaatcctgactgatgactttgct
gacaaggagggcctggaaatgggtgatgagtattttgccaatctggaccatatcgagagc
gtggagaacttcaaggaaggatatgagagtgatgccccctgttcctctgacagcagtggt
gtagacttgaaggaccaggaagatggcaacagcggtacagaggaccccgaagagtccaat
gacgatagctcagatgataacttctgtaaggatgaggacttcagcaccagctcggtgtgg
cgcagctatgctacccggcggcagacccggggccagaaggagaatggattgtctgagatg
ccttccaaggactctcgccccccagacgttgggcccccacgtgttcctgtccctccatcg
atccctgtaggtggctgcaatccaccttcctctgaagagacacccaagaacaaagtggcc
tcgtggttgagctgcaatagtgtcagtgaaggtggctttgctgactctgatagccgttca
tccttcaaaactagtgaaggtggggaaggtcacgctgggggaggcagaggggaggctgag
aaggcttccacctcagggctgggcttcaaggatgagggtgacatcaagcagcccaagaaa
gaggaccctgatgaccggaacaagatgtcagtagttactgaaagctctagaaattatggt
tacaatccttctcccgtgaagactgaaggacttcgccgcccaccaagtaagactagcatg
catcagagccgacgactcatggcctctgctcagtcaaaccctgatgacatcctgacactg
tccagcagcacagaaagtgagggggaaagtgggaccagccgaaagcccactgctggccag
acttcagccacagccgttgacagtgatgatatccagaccatctcctctggctctgaaggg
gatgactttgaggacaagaagaacatgtctggtccaatgaagcgccaagtggcagtaaaa
tcaacccggggttttgctcttaaatcaacccatgggattgccattaaatcaaccaacatg
gcatccgtggaaaagggagagagtgcacctgttcgtaagaacacacgccaattctacgat
ggggaggagtcttgctacatcatcgatgccaagcttgaaggcaacctgggccgctacctc
aatcacagctgcagccccaacctgtttgtccagaatgtcttcgtggatactcatgatctt
cgcttcccgtgggtggccttctttgccagcaaaatccgggctgggacagaactcacctgg
gactacaactacgaggtgggcagcgtggagggcaaggagctgctttgctgctgtggggcc
atcgaatgcagagggcgtcttctttag
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integrated database retrieval system