Lipotes vexillifer (Yangtze River dolphin): 103088216
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Entry
103088216 CDS
T03090
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103088216 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lve03021
]
103088216 (POLR1B)
Enzymes [BR:
lve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103088216 (POLR1B)
Transcription machinery [BR:
lve03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
103088216 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
103088216
NCBI-ProteinID:
XP_007446072
UniProt:
A0A340WEQ8
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
MLSGACGAAAGIRCAGGLMDPGGRWRHLPSGPSLKHLTDPSYGIPRERQKPALQELTRAH
VESFNYAVREGLSYAVQAIPPFEFAFKDERISLTIVDAVISPPTVPKGSICKELNVYPAE
CRGRRSTYRGKLTADISWAVNGISKGIIKQFLGYVPIMVKSKLCNLYNLPPKALIQHHEE
AEEMGGYFIINGIEKVIRMLIMPRRNFPIAMVRPKWKSRGPGYTQYGVSMHCVREEHSAV
NMNLHYLENGTVMLNFIYRKELFFFPLGFALKALVSFSDYQIFQELIKGKEEDSFFRNSV
SQMLRVVMEEGCSTQKQVLSYLGERFRVKLSLPDWYPNEHAAEFLFSQCICIHLKSNTEK
FYVLCLLTRKLFALAKGECMEENPDSLVNQEVLTPGQLFLMFLKEKLEAWLASIKIAIDK
KAQKTTVSLNTENLMKIFNLGTDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNF
IRYLSHFRCVHRGADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTTICEVVT
QFVYTASIPALLCNLGVTPVDGAPHRPYSECYPVLLDGVMVGWADKELVPGIADSLRHFK
VLREKRIPPWMEVVLVPMTGKPSLYPGLYLFTTPCRLVRPVQNLELGKEELIGTMEQIFM
NVAIFEDEVLAGVTTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLT
FQDRSDNKLYRLQTPQSPLVRPYMYDYYDMDNYPVGTNAIVAVISYTGYDMEDAMIVNKA
SWERGFAHGSVYKSECIDLSEKIKQGDDSLVFGVKPGDPRILQKLDEDGLPFIGAQLQYG
DPYYSYLNLNTGESFVMYYKSKENCIVDNIKVCSNDTGNGKFKCVCITMRVPRNPTIGDK
FASRHGQKGILSRLWPVEDMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHG
LCHDATPFIFSEENSALEYFGEMLKAAGYNYYGTERLYSGISGLELDADIFIGVVYYQRL
RHMVSDKFQVRTTGARDKVTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCS
DRSVAHVCVKCGSLLSPLLEKPPPSWSTMRNRKYNCTLCNRSDTIDTVAVPYVFRYFVAE
LAAMNIKVKLDIV
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgctttccggcgcgtgtggagccgctgctggcatccggtgtgcaggcggactcatggat
cccggaggccggtggcggcacctgcccagcgggcccagcctaaagcacttgaccgacccc
tcttacgggatcccgcgggagcggcaaaagccagcgttgcaggagctgacgcgggcgcat
gtcgagtccttcaactacgctgtgcgcgaggggctcagctacgcggtgcaggccatccct
ccctttgaatttgctttcaaagatgagcggatctctcttactattgtggatgctgtcatc
agtccacccacagttccaaaagggagcatctgtaaagagctcaatgtttatccagcagaa
tgcaggggccgaaggagcacctaccggggaaagctgacagccgatatcagctgggcagtg
aatggaatctcaaaaggaatcattaaacagtttcttggctatgttcccatcatggtgaaa
tccaagctttgcaacttatacaaccttcctccaaaagccctcatccaacaccacgaggaa
gcagaggaaatgggaggctattttataatcaatggcatcgaaaaagtcatccgaatgttg
attatgcctcgcagaaatttccccatcgcaatggtaagaccaaaatggaaaagcagaggg
cctggctatactcagtatggagtttcaatgcactgtgtgagggaagaacattccgccgtc
aatatgaaccttcactacttggaaaatggcacggttatgttgaactttatttaccggaaa
gaactgtttttttttcctttgggatttgcacttaaggcacttgtcagcttttccgattat
cagatttttcaggagctcatcaaaggaaaggaagaggactctttctttaggaactctgtt
tctcagatgttaagggttgtaatggaagagggatgttccacacaaaaacaggtccttagc
tatctgggtgaacgcttcagagtaaaactcagtcttcctgactggtacccaaatgaacat
gctgcagagtttctcttcagccagtgcatctgtatccacttgaaatccaacactgagaag
ttttacgtgctttgtctcctgacccggaagctctttgctttagccaaaggagagtgcatg
gaggagaatcccgacagtttagtgaatcaagaggtcctgacccccgggcagctcttcctc
atgttcctgaaggaaaaattggaagcttggttagcatctattaaaatagctatagacaag
aaggcccagaagaccactgtgtccttaaacactgaaaatttgatgaagatttttaatctg
ggaacagaccttacaaaaccatttgaatatcttcttgctactgggaatctacgttctaaa
acaggtcttggcttcctgcaagattccggactctgtgttgtggctgacaagctgaacttc
atacgctatctctcccatttccgctgtgtgcacagaggggcagattttgccaagatgcgg
accaccacagtacgcaggctgctgccggagtcctggggtttcctttgccccgtgcacacc
cccgacggggagccctgtggtctgatgaaccacttaaccaccatatgtgaggtcgtcaca
cagtttgtgtatacagcatctattccagctttgctctgcaacttgggagtcactccagtt
gatggagctccacatcggccatacagcgagtgctaccctgtcctgctggacggtgtcatg
gttggctgggcggataaggagcttgttcctggcattgccgattctctccgacattttaag
gttttgagagaaaaaagaattcctccctggatggaggtggtcctggtccccatgacagga
aaaccaagtctgtacccaggattgtacctttttaccactccttgcagactggtgcggcct
gtgcagaacttggagttgggcaaagaagaactaattggaactatggagcagatcttcatg
aacgttgccatctttgaggatgaggttttggctggcgttaccacccaccaggagctcttc
cctcacagcctgctgagtgtgatcgccaacttcatccctttctctgatcacaaccagagt
ccgagaaacatgtaccagtgccagatgggtaagcagactatgggctttccactcctcact
tttcaagaccggtcagataataaactgtatcgtcttcagactccacagagccctttagtg
agaccatacatgtatgattattatgacatggataactatccagttgggacaaatgccatc
gttgctgttatttcttacactggctatgatatggaagatgccatgattgtgaataaggcc
tcttgggaacgaggctttgcccatggaagtgtctacaagtccgagtgtatagatctgtct
gaaaaaatcaaacaaggagatgatagtctggtgtttggagtcaaacctggtgacccacgg
attctgcagaagttggatgaagacggattgccatttattggagcacaactgcagtatgga
gatccatattacagctacctaaacctcaacactggggaaagctttgtgatgtactataag
agtaaagaaaattgtattgtggataacatcaaagtgtgcagtaatgacactggaaatggc
aagttcaagtgtgtttgcatcacgatgagagtccctcggaacccaactatcggggataaa
tttgccagtcgtcatgggcagaagggcatcttgagcagactgtggccagttgaggacatg
ccattcactgagagcgggatggttccagacattctgttcaatcctcacggttttccatcc
cgcatgaccatcggtatgttgattgagagtatggcagggaagtctgcagctttacatggt
ctctgccacgatgctacgcccttcatcttctcagaggagaactcggccctggaatacttt
ggtgagatgttgaaggctgctggctacaactactatggcactgagaggttgtatagtggc
atcagtgggctagagctggacgcagacatcttcataggtgtggtttattaccaacgctta
cgccacatggtctcagacaaattccaagttaggacaacaggagccagagacaaagtcact
aaccagcctatcgggggaagaaatgtccagggtggaatccgttttggggagatggagcgg
gatgctcttttagctcatggtacatcttttctccttcacgaccggctcttcaactgctcg
gatcggtctgtagcccacgtgtgtgtgaagtgtggtagtttgctctccccgctgttggag
aagccacccccatcgtggtccaccatgcgcaacaggaagtacaactgtactctgtgtaat
cgcagtgacaccattgacactgttgctgtgccttacgtctttcggtattttgtagctgaa
ctggcagctatgaacatcaaagtgaaactggatatcgtttaa
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integrated database retrieval system
