Lipotes vexillifer (Yangtze River dolphin): 103089865
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Entry
103089865 CDS
T03090
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103089865 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lve03019
]
103089865 (CLP1)
Enzymes [BR:
lve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
103089865 (CLP1)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
103089865 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
MMR_HSR1
AAA_18
TniB
AAA_16
AAA_22
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
103089865
NCBI-ProteinID:
XP_007455764
UniProt:
A0A340X988
LinkDB
All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
MVIRGKKYEARHSSHTEKMGEEASDDKKPTTKFELERETELRFEVEASQSVQLELLAGMA
EIFGTELTRNKKFTFDAGAKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLYLNTHTALEQ
MRRQAEKEEERGPRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGT
MGALYIERPADVEEGFSIQAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRAS
VSGCVINTCGWVKGSGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKS
GGVVERSKDFRRECRDERIREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLG
MSQEDNQLKLVPVSPGRDMVHHLLSVSSAEGTEENLSETSVAGFIVVTSVDLEHQVFTVL
SPAPRPLPKNFLLIMDIRFMDLK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcagaggtaagaagtatgaagcaaggcacagcagccacacagaaaagatggga
gaggaggccagtgatgacaagaagccaactactaaatttgaactagagcgagaaacagaa
cttcgctttgaggtggaggcatctcagtcagttcagttggagctgctcgctggcatggca
gaaatctttggcacagagctgacccgaaacaagaaattcacctttgatgctggtgccaag
gtggctgttttcacttggcacggctgttctctacagctcagtggccgcaccgaggtggct
tatgtctccaaggacacccctatgttgctttatctcaacactcatacagccttggagcag
atgcggaggcaggcggagaaggaagaagaacgagggccccgggtgatggtagtgggcccc
actgatgtgggcaagtccacagtgtgccgtctgctgctcaactacgcagtgcgtttgggc
cgccggcccacttacgtggagttggatgtggggcagggctctgtgtccatccctggtacc
atgggggccctctacattgagcggccagcagatgttgaagagggattctctatccaggcc
cctctggtgtatcattttggctccaccactcctggtaccaacatcaagctttataataag
attacatctcgtttagcagatgtgttcaaccaaaggtgtgaagtgaaccgaagggcctct
gtgagtggctgtgtcattaacacctgtggctgggtcaagggctctggttaccaggcactg
gtgcatgcagcctccgcctttgaggtggacgtagttgtggttctggatcaagaacgactg
tacaatgaactgaaacgggacctacctcactttgtacgcaccgtgctgctccctaaatcc
gggggtgtggttgagcgctccaaggacttccggcgggaatgtagggatgagcgtatccgt
gagtatttctatggattccggggctgtttctatccccacgccttcaatgtcaaattttca
gatgtgaaaatctacaaagttggggcacccaccatcccagactcctgtctgcctttgggc
atgtctcaggaggacaatcagctcaagctagtgcctgtcagccctggccgagacatggtg
caccacctcctgagtgtcagctctgctgagggcacagaggagaacctttcagagaccagt
gtggccggcttcatcgtggtgaccagtgtggacctagagcatcaggtgtttactgttctc
tctccagctccccgcccactgcctaagaacttccttctcatcatggatatccggttcatg
gatcttaagtag
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integrated database retrieval system
