Limimaricola variabilis: T8T21_02250
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Entry
T8T21_02250 CDS
T09625
Name
(GenBank) GMC family oxidoreductase
KO
K06151
gluconate 2-dehydrogenase alpha chain [EC:
1.1.99.3
]
Organism
lvr
Limimaricola variabilis
Pathway
lvr00030
Pentose phosphate pathway
lvr01100
Metabolic pathways
lvr01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
T8T21_02250
Enzymes [BR:
lvr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.3 gluconate 2-dehydrogenase (acceptor)
T8T21_02250
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Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
DAO
2-Hacid_dh_C
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
WPY94966
LinkDB
All DBs
Position
complement(452924..454684)
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AA seq
586 aa
AA seq
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MAKQLSGVDVVLVGFGWTGAIYAEKLTDAGLDVLALERGPWRDTTKDFATTFAQDELRYY
WRHGMFQEAAQSTVTFRNNSAQTALPMRSWGSFLPGNGVGGSGVHWNGQTYRFLPSDFVA
KSHNEERYGPLPEGMTIQDYGVTYEELEPHFDYFEKICGICGKAGNLNGNIVAGGNPFEG
PRSDEYPNPPMEMTFSQDRFEAAARNVGLNPFPVPSANMSRAYVNPLGLQLAPCTYCGFC
EKHGCGNYSKSSPQTTIIPALMKRPNFALRTDSEVLSIEKSADGSRTTGVTYVDTSGESF
FQPADIVVLCAYPLENTRLMLLSQIGEPYDPRSGEGVVGKNYCYQVMSGATVFFDKEYTN
GFVGAGALGMAVDDYNGDNFDHSGLGFIGGGYIACYTTNARPIESHPVPDGVPGWGSEWK
QAVQANFLKTASVGVHGASMAHRSNYLDLDPTYTDRHGRPLLRMTFDFTLNDRRLSAHLT
PVAEEIARGMGGREVVVGERKGSYDSVPYQTTHNTGGTIMGTDPQTSVCNRYCQSWDLPN
LFVAGAGLFPQNAGYNPTDTVGALAYWSVDAIISKYLSQPGPLVQA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcagctctcaggtgtcgacgtggtcctggtcggcttcggctggaccggcgcg
atctatgccgagaagctgacagacgccgggcttgacgttctggccttggagcgggggcca
tggcgcgacacgaccaaggatttcgccaccaccttcgcgcaggacgagctgcgctactac
tggcggcacgggatgttccaagaggcggcgcaatcaacggtcaccttccgaaacaactct
gctcagacggcgctgccaatgcgcagttgggggtcgttcctgccgggcaatggcgtcggt
ggatcaggggtgcactggaacggccagacctatcgcttcctgccctcggatttcgtggcc
aagagccataacgaggagcgctacggccccctgcccgaggggatgacgatccaagactac
ggtgtcacctatgaggagctcgagccgcatttcgactattttgagaagatctgcggcatc
tgcggcaaggcgggcaacctgaatggcaatatcgtcgcgggcggcaaccccttcgagggt
ccgcgcagcgacgaatatcccaacccgccgatggagatgaccttctcgcaggaccgcttc
gaggcggctgcgcgcaatgtcgggctcaatcccttcccggtgccctcggccaacatgtcg
cgcgcctatgtcaatccactgggcctgcaactggcgccctgcacctattgtggtttttgt
gaaaagcacggctgcggcaactactcgaagtcctcgccgcaaacgacgatcatcccggcg
ctgatgaaacggccgaactttgcgctgcgcaccgacagcgaggtgctgtcgatcgagaaa
tcggcggacgggtcgcggacaacgggcgtcacctatgtcgataccagcggtgagagcttc
ttccagcccgccgatatcgtcgtgctctgcgcctatccgctggagaacacccggctgatg
ctcctttcgcagatcggcgagccttacgacccgcgcagtggggaaggcgtggtcggcaag
aactactgctatcaggtgatgtccggcgccacagtattcttcgacaaggaatacaccaac
ggcttcgtcggcgctggggccttgggcatggcggtcgacgactacaacggcgacaacttc
gaccattccggtctcggcttcattggcggcggctatatcgcctgctacaccaccaatgct
cgcccgatcgagagccaccccgtcccggacggtgtgcctggctggggcagcgaatggaag
caggcagtgcaggccaactttctcaagaccgcctcggtgggggtccatggcgcttctatg
gcgcatcgcagcaactaccttgatctcgacccgacttataccgacaggcatggccgtccg
ctgttgcgcatgacattcgacttcacactcaacgaccgccggttgagcgctcatctcacc
cctgtcgccgaggagattgcgcggggcatgggcggacgcgaggtcgtggttggcgagcgc
aagggctcctacgattcggtcccctaccagaccactcacaacaccggcggcacgatcatg
gggacggacccgcaaaccagcgtgtgcaaccgctattgccaaagctgggacctgccgaac
ctcttcgtcgctggggccgggctgttcccgcagaatgctggctacaacccgaccgacacg
gtcggcgcactggcctactggtcggtggatgcgatcatcagcaagtatctgagccagccg
ggcccgctggtgcaggcatga
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