Limimaricola variabilis: T8T21_15360
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Entry
T8T21_15360 CDS
T09625
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
lvr
Limimaricola variabilis
Pathway
lvr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
T8T21_15360
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lvr01007
]
T8T21_15360
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lvr03016
]
T8T21_15360
Enzymes [BR:
lvr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
T8T21_15360
Amino acid related enzymes [BR:
lvr01007
]
Aminoacyl-tRNA synthetase
Class I (A)
T8T21_15360
Transfer RNA biogenesis [BR:
lvr03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
T8T21_15360
BRITE hierarchy
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1b
tRNA-synt_1c
Anticodon_2
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
WPY94463
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All DBs
Position
3077935..3079515
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AA seq
526 aa
AA seq
DB search
MSELRDAAMQSKAWPFEEARALLKRLNGKDPEKGYVLFETGYGPSGLPHIGTFGEVLRTT
MIRRAFEAISDIPTRLVCFSDDLDGMRKVPENVPQQEMMHENLQRPLTSVPDPFGTHDSF
GGHNNAMLRRFLDTFGFEYEFVSATEFYRAGKFDDTLRLAAERYDDIMAIMLKSLRDERR
ETYSCFLPIHPETGRVLYVPMKHVDAKEHTVTFDDEDGREWTLPVTGGNVKLQWKPDFGA
RWAALGVDFEMYGKDHSTNTPIYDGICKVLGGRAPHHFTYELFLDDQGQKISKSKGNGLT
MDEWLSYASTDSLSYFMYLKPKTAKRMHFDVIPKMVDEYHQQLRAYPGQDLKAQLANPVH
HIHQGDVPASDMVVPFQMLLNLVSVSGAEDKDTLWGFIRRYAPEAAPETHPGLDAAAGFA
IRYYEDRVKPTKTYRAPTEEERAALEDLRARLAAWQGGADADGLQSEVFAVGRERQFEPM
RDWFKALYEILLGASEGPRFGGFIALYGVENTVALIDRALAGELAG
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaactgcgcgacgcagcgatgcagagcaaggcctggcccttcgaagaggcgcgc
gcgctgctcaaacgtctgaacggcaaggaccccgagaaggggtatgtcctgttcgagacc
ggctacgggccgtcgggtctgccgcatatcggcaccttcggcgaggtgctgcgcaccacg
atgatccgccgcgccttcgaggcgatctcggacatcccgacgcggctggtctgcttctcg
gacgatctcgacggcatgcgcaaggtgcccgagaacgtgccccaacaggagatgatgcac
gagaacctgcagcggccgctgacctccgtacccgatcccttcggcacgcatgacagcttc
ggcgggcacaacaacgccatgctgcgccggttccttgacaccttcggcttcgagtacgag
ttcgtctcggcgaccgagttctaccgggcgggcaagttcgacgacacgctgcgcctggcc
gccgagcgctatgacgacatcatggcgatcatgctgaaatccttgcgcgacgagcggcgc
gagacctattcgtgcttcctgccgatccacccggagaccggccgcgtgctctacgtgccg
atgaagcatgtcgacgccaaggagcacaccgtcaccttcgatgacgaggacgggcgcgaa
tggaccctgccggtcaccggcggcaacgtgaagctgcagtggaagcccgatttcggcgcc
cgctgggccgcgctcggcgtcgatttcgagatgtatggcaaggaccactcgaccaacacg
ccgatctatgacggcatctgcaaggtgctgggcggccgcgcgccgcaccacttcacctac
gagctgttcctcgacgatcagggccagaagatctccaagtccaagggcaacggcctgacc
atggacgagtggctgagctacgcctcgaccgatagcctaagctacttcatgtatctcaag
cccaagaccgcaaagcggatgcatttcgacgtcatccccaagatggtcgacgagtatcac
cagcagctgcgcgcctatccgggccaggacctcaaggcgcagctggcgaacccggtgcac
cacatccaccagggcgacgtgcccgcctcggacatggtggtgccgttccagatgctcttg
aacctcgtctcggtgtcgggtgccgaggacaaggacacgctgtggggcttcatccggcgc
tacgcgcccgaggccgcgcccgagacgcatccggggctcgacgcggcggcgggcttcgcg
atccgctactacgaagaccgcgtgaagccgaccaagacctaccgcgcgccgaccgaagag
gagcgcgccgcgctcgaggatctgcgcgcgcggcttgccgcgtggcagggcggggcggat
gccgacgggctgcaatccgaggtcttcgcggtcggtcgcgagcggcagttcgagccgatg
cgcgactggttcaaggcactctacgagatcctgctgggtgcctccgaagggccgcgcttc
ggcggtttcatcgcgctgtacggcgtcgagaacacggtcgcgctgatcgaccgggcgctc
gcgggcgagttggcgggctaa
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