Leptonychotes weddellii (Weddell seal): 102727098
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Entry
102727098 CDS
T08708
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww04721
Synaptic vesicle cycle
lww04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
102727098 (SLC6A4)
04721 Synaptic vesicle cycle
102727098 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lww02000
]
102727098 (SLC6A4)
Transporters [BR:
lww02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
102727098 (SLC6A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
102727098
NCBI-ProteinID:
XP_006734595
UniProt:
A0A2U3XT17
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All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
METTPLNSQKELSACKDKEDCQENGVLQKGVPVPEDKVESGHVSNGYSAVPSPGAGDDSQ
HSIPATTTALAAEAHQGERETWGKKMDFLLSVIGYAVDLGNIWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIGFYIASYYNTIM
AWALYYLISSFTDQLPWTSCTNSWNTGNCTNYFSENNVTWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGLSWQLTLCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLGVVITCFFGSLAS
LTFGGAYVVKLLEEYATGPAVLTVAFIEAVAVYWFYGITQFCSDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPQWSIILGYCIGTSSFICIPTYIAYRLIIT
PGTFKERIIKGITPETATEIPYGDIHLNAI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacgcccttaaattcccagaaggagctatcagcgtgtaaggataaagaagat
tgtcaggaaaacggagttctgcagaagggtgtccctgtccctgaggataaggtggagtct
ggccacgtctccaacgggtactcagcggtgccgagccctggtgccggagatgactctcag
cactccattccggccaccaccactgccctagcggctgaggctcatcaaggggaacgggag
acctggggcaagaagatggatttcctcctctcggtcattggctatgccgtggacctgggc
aacatctggcgctttccctacatctgttaccagaatggagggggggcattcctcctgccc
tacacgatcatggccatttttggggggatcccactgttctacatggagctcgcgctgggc
cagtaccaccgaaatggatgcatttctatatggaggaaaatctgcccgattttcaaaggg
atcggttacgccatctgcatcatcggcttctacatcgcctcctactacaacaccatcatg
gcctgggcgctctactacctcatctcctccttcaccgaccagctgccctggaccagctgc
acgaactcctggaacactggcaactgcaccaactacttctccgagaacaacgtcacctgg
acgctgcactcgacgtcccccgcagaagaattttacacgcgccacgttctgcagatccat
cggtctaagggacttcaggacctgggggggctcagctggcagctcaccctctgcatcatg
ctgatcttcactgttatctacttcagtatctggaagggtgtcaaaacgtctggcaaggtg
gtatgggtgacagccaccttcccttatatcatcctctcggtcctgctggtaaggggggcc
accctccccggagcctggaggggtgttctcttttatttgaaacccaactggcagaaactc
ctggagacaggggtatgggtagatgctgccgctcagatcttcttctctcttggtcctggc
tttggggtcctattggctttcgctagctacaacaagttcaacaacaactgttaccaagat
gccctggtgaccagcgtggtgaactgcatgacgagcttcgtttccggatttgtcatcttc
acggtgctcgggtatatggccgagatgaggaacgaggatgtgtccgaggtggccaaagat
gcaggccccagcctcctcttcatcacgtatgcagaagccatagccaacatgccagcatcc
acattctttgccatcatcttcttcctgatgttaatcacgctgggcctggacagcaccttt
gcaggcttggaaggggtgatcacagctgtgctagatgagtttccgcacatctgggccaag
cgccgggagtggtttgtgcttggtgtggtcattacctgcttctttggatccctggccagc
ctgacttttggaggggcctacgtggtgaagctgctggaggagtatgccacggggcccgct
gtgctcaccgtcgcctttatagaggctgttgctgtgtattggttttatggcatcactcag
ttctgcagtgacgtgaaggaaatgcttggcttcagccctgggtggttttggaggatctgc
tgggtagccatcagccctctctttctcctgttcatcatttgcagttttttgatgagcccg
ccccagctccgacttttccagtataactatcctcagtggagtatcatcctgggttactgc
ataggaacctcatctttcatctgcatccccacatatatagcttaccggctgatcatcact
ccagggacatttaaagagcgtattattaaaggtatcactccagaaacagcgacagaaatt
ccctatggggacatccacttgaatgccatataa
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