Lysobacter yananisis: RDV84_23595
Help
Entry
RDV84_23595 CDS
T09342
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
lya
Lysobacter yananisis
Pathway
lya00071
Fatty acid degradation
lya00280
Valine, leucine and isoleucine degradation
lya00310
Lysine degradation
lya00362
Benzoate degradation
lya00380
Tryptophan metabolism
lya00410
beta-Alanine metabolism
lya00640
Propanoate metabolism
lya00650
Butanoate metabolism
lya00907
Pinene, camphor and geraniol degradation
lya00930
Caprolactam degradation
lya01100
Metabolic pathways
lya01110
Biosynthesis of secondary metabolites
lya01120
Microbial metabolism in diverse environments
lya01200
Carbon metabolism
lya01212
Fatty acid metabolism
Module
lya_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RDV84_23595
00650 Butanoate metabolism
RDV84_23595
09103 Lipid metabolism
00071 Fatty acid degradation
RDV84_23595
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RDV84_23595
00310 Lysine degradation
RDV84_23595
00380 Tryptophan metabolism
RDV84_23595
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RDV84_23595
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RDV84_23595
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RDV84_23595
00930 Caprolactam degradation
RDV84_23595
Enzymes [BR:
lya01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RDV84_23595
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RDV84_23595
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RDV84_23595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
Pyr_redox_2
DAO
ApbA
UDPG_MGDP_dh_N
AlaDh_PNT_C
MORN
Motif
Other DBs
NCBI-ProteinID:
WMT02910
UniProt:
A0AA51SFG5
LinkDB
All DBs
Position
5732798..5734867
Genome browser
AA seq
689 aa
AA seq
DB search
MTAALDGLPAFDGLRARHWHTELREDGVLVLSFDREGSPVNTFAQEVLIELDSLLERLAL
DPPKGLVLRSAKASGFIAGADIKEFQTFDEKGTVGDAIRRGQQVFQRLAELPCPTVAAIH
GFCMGGGTEISLACRYRVASTDPSTRIGLPEVKLGIYPGWGGSVRLPRLVGAPAAFDMML
TGRSLSGSAARAIGLVDKTAEPAVLVDTAAALALRGAQRPFKQRFTAWASNTWLARKILA
PMLVKQVARKAKKDHYPAPYALISTWERASGGVQALLAAERKSVVKLSGTPTARNLIRVF
FLQERLKGQGGKDHKIKNVHVVGAGVMGGDIAAWSAYKGFEVTLSDREQRFIDGALERAQ
ALFAKKVKDEAKRPAVAARLKGDLAGDGVKDADLVIEAIIEKPEAKRELYDAVEPQLKPD
ALLTTNTSSIPLDELREHIRRPAQFAGLHYFNPVALMPLVEIIRHDRMAPETEQRLAAFC
RALDKLPVPVAGTPGFLVNRVLFPYMLEAGTAFAEGIPGAAIDKAAVKFGMPMGPIELID
TVGLDVAAGVGAELAPFLGLTVPAALAGVEPGKRGKKDGQGLYKWENGRAQKPELAKDYK
APADLEDRLILPMVNEAVACLHDGVVADGDLLDAGVIFGTGFAPFRGGPIQYVRETGVDN
VLTRLKQLQARYGERFAPRPGWDSPALRP
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagccctcgacggcctccccgcgtttgacgggctccgcgcccgccattggcat
accgaactgcgcgaggacggcgtcctggtgctgtccttcgatcgcgaaggctccccggtc
aacaccttcgcccaggaagtgctgatcgaactcgacagcctgctcgagcgcctcgccctg
gacccgcccaagggcctggtgctgcgctcggcgaaggcctcgggcttcatcgccggcgcc
gacatcaaggaattccagaccttcgacgagaagggcacggtcggcgacgcgatccggcgc
ggccagcaggtgttccagcgcctggccgagctgccctgccccacggtcgcggcgatccat
ggcttctgcatgggcggcggcaccgagatctcgctggcctgccgctaccgcgtcgccagc
accgatccgtcgacccgcatcggcctgccggaagtgaagctcggcatctatcccggctgg
ggcggcagcgtgcgcctgccgcgcctggtcggcgcgccggccgcgttcgacatgatgctc
accggccgcagcctgtcgggctcggccgcgcgcgcgatcggcctggtcgacaagaccgcc
gagcccgccgtgctggtcgacaccgccgccgcgctggccttgcgcggcgcgcagcgtccg
ttcaagcaacgcttcaccgcctgggccagcaacacctggctcgcgcgcaagatcctcgcg
ccgatgctggtcaagcaggtcgcgcgcaaggccaagaaggaccactaccccgcgccgtac
gcgctgatctcgacctgggagcgcgccagcggcggcgtgcaggcgctgctcgcggccgag
cgcaagtcggtggtgaagctgtccggcacaccgaccgcgcgcaacctgatccgggtgttc
ttcctgcaagagcggctcaagggccagggcggcaaggatcacaagatcaagaacgtgcac
gtggtcggcgccggcgtgatgggcggcgacatcgccgcgtggtcggcctacaagggtttc
gaagtcaccctgagcgaccgcgagcaacgcttcatcgacggcgcgctggagcgcgcgcag
gcgctgttcgccaagaaagtgaaggacgaggccaaacgtccggcggtggcggcgcggctc
aagggcgacctcgccggcgacggcgtcaaggacgccgacctggtgatcgaggcgatcatc
gaaaagcccgaagccaagcgcgagttgtacgacgcggtcgaaccgcagctcaagcccgac
gcgctgctgaccaccaacacctcgtcgatcccgctcgacgaactgcgcgaacacatccgc
cgtccggcgcagttcgccggcctgcactacttcaacccggtcgcgctgatgccgctggtg
gagatcatccgccacgaccgcatggcgccggagaccgagcagcgcctggccgcgttctgc
cgcgcgctcgacaagctgccggtgccggtcgccggcacgcccggcttcctggtcaaccgg
gtgctgttcccgtacatgctcgaagccggcaccgcgttcgccgaaggcattccgggcgcg
gcgatcgacaaggcggcggtgaagttcggcatgccgatgggcccgatcgaactgatcgac
accgtcggcctggacgtggccgcgggcgtcggcgccgaactcgcgccgttcctcggcctg
accgtgccggcggcgctggcgggcgtggagcccggcaagcgcggcaagaaggacgggcaa
ggcctgtacaagtgggagaacggccgcgcgcagaagcccgagctggcgaaggactacaag
gcgccggccgacctggaagaccgcctgatcctgccgatggtcaacgaagcggtggcctgc
ctgcacgacggcgtggtcgccgacggcgacctgctcgacgccggcgtgatcttcggcacc
ggcttcgctccgttccgcggcggtccgatccagtacgtgcgcgagaccggcgtcgacaac
gtgctgacgcggctcaagcaattgcaggcgcgctacggcgagcgcttcgctccgcgtccg
ggctgggattcgccggcgttgcgtccgtaa
DBGET
integrated database retrieval system