Lysinibacillus sp. B2A1: C3943_03385
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Entry
C3943_03385 CDS
T05347
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lyb
Lysinibacillus sp. B2A1
Pathway
lyb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lyb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C3943_03385 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lyb03021
]
C3943_03385 (rpoE)
03400 DNA repair and recombination proteins [BR:
lyb03400
]
C3943_03385 (rpoE)
Transcription machinery [BR:
lyb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C3943_03385 (rpoE)
DNA repair and recombination proteins [BR:
lyb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C3943_03385 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
TPR_20
CDK5RAP3
Motif
Other DBs
NCBI-ProteinID:
AVK82660
UniProt:
A0A2S0JGW0
LinkDB
All DBs
Position
716436..716987
Genome browser
AA seq
183 aa
AA seq
DB search
MHELNFREMTKEQLAEESLINLAYVILNEKRASVSFNDLLTIIQELVGYSNEEIKARLLQ
FYTDLNVDGRFLYNQETGWGLREWFKVEQIEEETAPSVKTHKKKSKATLDDEDLDEDLDL
EEEDIDFDEDYEEFVEEDDVEEDEAKEDIDFDDEDIEDIDEEIDEDFIEEDDDEEFDEEE
EEI
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgaattgaattttcgtgaaatgacaaaggaacaattagcggaagaatcgttaatt
aatttagcttatgtaattttaaatgaaaaacgtgcctcagtgtcttttaatgacttacta
acaatcattcaggagcttgtaggctatagtaatgaagaaattaaagcacgcctactacaa
ttttacacagatctgaatgtagatggtcgcttcttatacaatcaagagacaggttggggt
ctacgagaatggtttaaagttgagcaaattgaggaagaaacggctccttctgtgaaaact
cataagaaaaaatctaaagctacccttgatgatgaagatctagatgaagatttagattta
gaagaagaagacattgactttgatgaagattatgaggaatttgttgaggaagacgatgtt
gaggaagacgaagcgaaagaagacattgattttgacgatgaagatatagaggacatcgat
gaagaaatcgatgaggactttatcgaagaagatgacgatgaggaattcgacgaagaagag
gaagaaatttaa
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