Lysinibacillus sp. CD3-6: FH508_0004295
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Entry
FH508_0004295 CDS
T08381
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
lyc
Lysinibacillus sp. CD3-6
Pathway
lyc00190
Oxidative phosphorylation
lyc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lyc00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
FH508_0004295
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FH508_0004295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lyc03019
]
FH508_0004295
Enzymes [BR:
lyc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
FH508_0004295
Messenger RNA biogenesis [BR:
lyc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FH508_0004295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
UED81118
LinkDB
All DBs
Position
918323..920479
Genome browser
AA seq
718 aa
AA seq
DB search
MTTEVTNNRLHEDEFSEAHSRLLEEIAKPQYYNNRELSWLAFNERVLEEAEDVNNPLLER
LKFLAIFSSNLDEFFMVRVAGLQDQVRAGFHKPENKSGLTPKEQLAKIAERTQALVRRQT
EVYRHLIYDLLPQHNVHIADMKDLNSTQKAFINEMFAETIFPVLTPVAVDAYRPFPTLLG
KTLNLLVLLEQDETDFESREKVAIVQVPSVLDRYIKVPCAEGETVIVLLEDVIVAHIEKL
FYGYSVKSAQAFRLTRNADLTIHEEGARDLLVEIEKELKKRKWGVGSRLEVRVGEMNEEV
LAYLLEEFEIEENDVFHIDGPLDLTFMFSFVKGISVGREHLEYESFIPQPPLDLQSDENI
FEKALQQDIFFHHPYESFAPIVDFISEAAINPNVLAIKQTLYRVSGNSPIIQALKLAAEN
GKQVTVLVELKARFDEENNVHWAKQLEQAGCLVIYGMNNLKTHSKITLVVSRRNGKIERF
VHLGTGNYNDATAKIYTDMGIITSDKEFGIDATNFFNYLSGYTEKPTFNHLVVAPFDIRD
EFIRLMDEEISCHKKYGNGFIRAKMNSLTDKDLMMKLYEASIAGVKVELIIRGICCIRPG
IPNISDNITVTSIVGRFLEHSRIYWFHHNGENKVYLSSADMMTRNMIKRVEILFPVYSIE
AKARIMDIMNKQLEDTAKARIQDSNGKYHYKEFDRSEDPINSQEIFLKDALKPTLDEE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgacaacggaagtaacgaacaaccgcttacatgaagatgaattttcagaagcacatagc
cgtttactcgaagaaattgcaaagcctcaatattataataatcgggaattaagctggctg
gcatttaatgagcgtgttttagaagaagcagaggatgtcaataatcctctgctggaacgt
ctgaagtttttagcgatatttagctccaatttagatgagttttttatggtgcgcgtagca
gggctacaggaccaagtgcgtgcaggctttcataaacctgaaaataaatcaggcttaaca
ccaaaagaacaattagcgaaaattgctgagcgtacacaagctttagtacgtcgccaaaca
gaagtatacagacatttaatatatgatttattgccacagcataatgtacatattgcggac
atgaaggatttaaatagtacgcaaaaagcatttattaatgaaatgtttgctgagacaatt
ttccctgtactcacacctgttgcagtagacgcttatcgaccatttccaacattgcttgga
aaaactttaaatttacttgtactattggaacaagatgaaacagattttgaaagccgtgaa
aaagtggcaatagtgcaagtaccatctgtattggatcgctatattaaagtaccttgtgct
gagggagaaacggttattgtgcttcttgaggatgttattgttgcccatattgaaaagctt
ttttatgggtacagtgttaaatctgcacaggcgttccgtttaacacgtaatgcggattta
acgattcatgaagaaggcgcacgcgatttactcgtggaaattgaaaaagagttaaagaaa
cgcaaatggggagtcggcagtcgccttgaagtacgcgtcggagaaatgaatgaagaagtc
cttgcttatttattagaagaatttgaaatcgaagagaacgatgtttttcatattgatggt
ccattggatttaacatttatgttttcgtttgtgaaaggtatttctgtaggacgagaacat
ttagagtacgaaagctttatcccgcagccacctttagatttacaatcagatgaaaatatt
tttgagaaagcattacaacaggacatttttttccatcatccatatgagtcatttgcaccg
attgtggactttatttcagaggccgctatcaatcccaatgtattagcaataaagcaaaca
ttgtatcgggttagtggtaattccccaataatacaagcattaaaactcgcggctgaaaat
ggtaagcaggtgaccgttttagtagagctaaaagcccgctttgatgaagaaaataatgta
cattgggcgaagcaactggaacaagcaggctgtcttgttatatacggtatgaataattta
aaaacacactctaaaataacgctagtagtgagtcgtcgaaatggaaaaattgaacgtttt
gtacatcttggcacaggaaattataatgatgccacagccaaaatttatacggacatgggc
attataacgtctgataaggaatttggtatcgatgcaacaaacttctttaattatttaagt
ggctatacggaaaagcctacttttaatcatttagtcgttgctccattcgatattcgtgat
gaatttatccgtttaatggatgaagaaattagctgtcataagaaatacggtaatgggttt
attcgcgctaaaatgaattcattaacggataaggatttaatgatgaagctttacgaagcc
tccattgctggtgtaaaagtggagcttattattcgtggtatatgctgtatacggccaggt
ataccgaacattagtgacaatatcaccgtcacaagcatcgttggtcgattcctggaacat
tcacggatttattggttccatcataatggtgaaaataaagtgtatttatcttcagcagat
atgatgacaagaaatatgataaaacgagttgaaattcttttccctgtctattcaattgaa
gcaaaagcccgtattatggatattatgaacaaacaacttgaggatacagcaaaggctcgt
attcaagattccaatggaaagtatcattataaagaatttgatcgaagcgaagaccctatt
aatagtcaggaaattttcttaaaggatgctctaaagcctacgctagatgaagaataa
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