Lysinibacillus sp. CD3-6: FH508_0018105
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Entry
FH508_0018105 CDS
T08381
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
lyc
Lysinibacillus sp. CD3-6
Pathway
lyc00730
Thiamine metabolism
lyc01100
Metabolic pathways
lyc01240
Biosynthesis of cofactors
lyc04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
lyc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
FH508_0018105 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
FH508_0018105 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lyc03016
]
FH508_0018105 (thiI)
Enzymes [BR:
lyc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
FH508_0018105 (thiI)
Transfer RNA biogenesis [BR:
lyc03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
FH508_0018105 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
NAD_synthase
ATP_bind_3
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
UED79343
LinkDB
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Position
complement(3630625..3631833)
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AA seq
402 aa
AA seq
DB search
MIWKEILIRYGELSTKGRNKMDFIRRLRENIRYAFADLGHLHIRTERDRMFIAIQDEAQM
NVLLAGLPKIFGIQSFSPVAACDKDMDAMKQLAITIMDTFKHEQLTFKVEVKRTDKTFPL
DSHSIQREIGGHVLPQYQNLSVKVKHPDVELRVEVRHDSTYMMAQVIPGAGGMPVGSNGK
SLLMLSGGIDSPVAGYLMMKRGVRLEAIHFFSPPYTSQNSLEKVKVLANELTKFGASIRL
HVIPFTEIQVLIKEKVPSNVSMTTTRRMMLKVADKVREEINALAIVTGESLGQVASQTLE
SLTAINAVTNTPILRPLISSDKLDIIEIAEKIGTYETSIQPFEDCCTIFTPASPKTKPKL
EKVEHYESFSDFEDLIERAVKNREVYIFPKKDQPTDKFADLL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatttggaaagaaatattaattcgttatggcgaactttctacaaaaggacgtaacaaa
atggattttatccgtcgtttacgtgaaaatattcgctatgcatttgcagatttagggcat
ttacacattcgtacagaacgtgatcgtatgtttattgccattcaagacgaggcacaaatg
aatgttttattagcaggattaccaaaaatatttgggattcaatcatttagtccagtagct
gcttgtgacaaagatatggatgccatgaaacaacttgcgattacgattatggatacattt
aaacatgaacaattaacttttaaagttgaagttaaacgtacagataaaacattcccgtta
gattctcacagtatacagcgtgaaattggtggacatgttttacctcaatatcaaaactta
tcagtaaaagtgaaacatcctgatgtagagctacgtgtggaagttcgccacgattcaact
tacatgatggcgcaagtgattcctggcgcaggtggaatgccagttggctctaacggaaaa
tctttattaatgctttcaggtggaattgatagtcctgttgcaggttatttaatgatgaaa
cgtggtgtacgtctagaagcaattcatttctttagcccaccatatacaagccaaaattca
ttggaaaaagtaaaagtgctagcaaatgagctaacaaaattcggtgcaagtattcgatta
catgtaattccgtttacagaaattcaagtgcttattaaagaaaaagtgccgtcaaatgtg
tcaatgactacaacgcgtcgtatgatgttaaaagttgcagataaagtacgtgaagaaatt
aatgcacttgctattgtcacaggggaaagtcttggacaagtagcaagtcagacgcttgaa
agcttaacagctattaacgcagttacgaatacaccaattttgcgtcctcttatatcgagt
gataaattagacattattgaaattgcggagaaaatcggcacatatgaaacgtcaattcag
ccatttgaagattgttgtacaatcttcacgcctgctagtccgaaaacgaaaccaaagctt
gaaaaagtagagcattatgaaagcttttctgattttgaagacctaattgagcgtgctgta
aaaaaccgtgaagtgtacattttcccgaaaaaagaccagcctacagataaatttgcagat
ttattataa
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