Lysinibacter sp. HNR: FrondiHNR_02950
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Entry
FrondiHNR_02950 CDS
T09375
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh00071
Fatty acid degradation
lyh00280
Valine, leucine and isoleucine degradation
lyh00310
Lysine degradation
lyh00362
Benzoate degradation
lyh00380
Tryptophan metabolism
lyh00410
beta-Alanine metabolism
lyh00640
Propanoate metabolism
lyh00650
Butanoate metabolism
lyh00907
Pinene, camphor and geraniol degradation
lyh00930
Caprolactam degradation
lyh01100
Metabolic pathways
lyh01110
Biosynthesis of secondary metabolites
lyh01120
Microbial metabolism in diverse environments
lyh01200
Carbon metabolism
lyh01212
Fatty acid metabolism
Module
lyh_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
FrondiHNR_02950
00650 Butanoate metabolism
FrondiHNR_02950
09103 Lipid metabolism
00071 Fatty acid degradation
FrondiHNR_02950
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
FrondiHNR_02950
00310 Lysine degradation
FrondiHNR_02950
00380 Tryptophan metabolism
FrondiHNR_02950
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
FrondiHNR_02950
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
FrondiHNR_02950
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
FrondiHNR_02950
00930 Caprolactam degradation
FrondiHNR_02950
Enzymes [BR:
lyh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
FrondiHNR_02950
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
FrondiHNR_02950
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
FrondiHNR_02950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
DAO
NAD_binding_8
2-Hacid_dh_C
NAD_binding_2
F420_oxidored
GIDA
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
WGD37888
LinkDB
All DBs
Position
677950..680214
Genome browser
AA seq
754 aa
AA seq
DB search
MIHWNRDSEGIITLVMDDPDNPVNTMNDAFIDSLDNTVTRLEAEIENVTGVILASAKQSW
FAGGNLRELITASPETAREEYARVTRMKKQFRRLELLRCPVVAAINGTALGGGYEVALAC
HHRIAIDSPKTRIGLPEITLGMFPGAGGATRTVRMLGLERALKTVLLPGTRFGVVGARGA
GLVDDVVETPEDLEAAAREWILTHPDAAQPWDRAGFRIPGGTPSTAGILPALAPFIQASP
ALLRQKLGGAHYPAPRALLASAVEGAQVDVDTALDIETRYFVSVIDTQVASNMIGAFFFD
LTEVVSGASRPREAERHTVNRLGVIGAGMMGSAIAYTATRVGIDTVLFDTDVLAQERVLG
YVRSRERERVLRQDPEASDDLIDSEVSRLLKRLNFSSTVTELAGTEFVIEAAYEDLEVKK
ALFMESENTVQPGTVLASNTSSLPIAEIADAVDDPSLVIGLHFFSPVDKMELVEIVRGPL
TSDKTLARAFDLARQLRKTPIVVNDSRGFFTSRVIFRYIEEALAVLGEDINPVTLERAAG
RAGYAVSPLKLIDELSLTLVDRIWRENARAQETLRVAGSVWSPATEARHTVDRMLRKGRL
GRAAGAGFYDYSEGKRGDLWPGLSDYPGQQPGSFPHHPGRVLQPDNTILENLGERMLCAE
ALEAVRCCEEGVIASLADANIGSLLGIGFPPWTGGVLRYIEQYEGGVAGFVARCGEFARL
HGPRFEPPVSLVRCAREGRSLAETYFKRAERESQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgattcactggaacagagactcggaggggattatcaccctcgtcatggatgatcccgat
aatccggttaacacgatgaacgatgccttcatcgattcgcttgataacaccgttacccgg
ttagaggcggagatcgagaacgttaccggcgtgattctggcctccgcaaagcagagttgg
tttgccggtggaaacctgcgcgaactcattaccgcctcaccagagaccgcgagggaggaa
tatgcgcgggtcacccgcatgaaaaagcaattccggcgtctcgaacttctgaggtgcccc
gttgtcgccgcaatcaatggaaccgccctcggcggaggctacgaggtggcgcttgcctgt
catcatcggatagcgatagacagcccaaaaactagaatcggtttgcccgagattaccctg
ggtatgtttcccggcgcgggcggagccacccgtacggtgcgtatgttgggtcttgagcgc
gcgctcaagaccgtgcttttgcccggaacccgttttggggttgttggggccaggggcgcg
ggtctagttgatgacgtggtggagacccccgaggatctagaggccgcagctcgagagtgg
attcttacccatcccgacgcagcgcagccctgggatcgggcggggttccggatccccgga
ggcaccccgagcactgcagggatattgcccgcgttggctccctttatacaggcctctcca
gctctgctgcgccagaagcttggtggggcgcattacccggctcctcgggcccttctggcc
agcgcggtcgagggcgctcaggtggatgtcgacaccgccctcgatattgagacgcgttac
ttcgtgagcgtgattgatacacaggtcgccagtaacatgatcggtgcgttcttctttgat
ctcaccgaggtcgtgtcgggggcctctcggcctcgggaagctgagcgccacaccgttaat
cgtcttggcgttataggtgcgggcatgatgggttctgccatcgcctacaccgcgacccgt
gtgggcattgatacggtgctttttgataccgatgtgctggctcaagaacgggtgctcggc
tatgtgcgttcccgggaacgggagcgggttttgcgacaagacccggaggcgtccgatgat
cttatcgattctgaggtgtcacggctactcaaacgtctgaacttctcctccacagtgacg
gagctcgcgggtactgagtttgtgattgaggccgcttacgaagaccttgaggtgaagaaa
gctctgtttatggagagcgaaaacacggtgcagcccggaaccgttttggcgagcaacacc
tcatcgctgcccatcgccgagattgcggatgccgtggatgatccctctctggttattggt
cttcacttcttttctccggtggacaagatggagcttgtggagatcgtgcgtggcccactc
acctccgacaaaaccctcgcccgggcttttgaccttgcgcggcaattgcgcaaaacaccg
attgtggtcaatgactcgcgaggcttttttaccagtcgggtgatctttcgatatatcgag
gaggccttagccgtcctgggggaggacatcaaccctgtaacgctagagcgggcggctggg
cgtgcagggtatgcggtgtcgcccctcaaactcattgacgaacttagcctgaccctggtt
gatcggatctggcgtgagaacgcccgcgctcaagagaccctgcgcgttgccggcagcgtg
tggtcccccgcgacggaggcccgtcacacggtagaccgaatgcttcgaaagggacggctc
gggcgtgcggcgggagccgggttctacgattattctgaggggaaacgtggtgatctctgg
cctgggctatcggattatcccggtcaacaaccaggctcctttcctcaccaccctgggaga
gtgcttcagccggataacaccatcctggagaaccttggggagcgaatgctctgcgccgag
gctcttgaggccgttcgctgttgcgaggagggagttatcgcctcgcttgcagatgccaat
atcggttcgctcctcggtatcggatttcccccgtggacggggggagtgttgcgctacatc
gaacagtacgagggcggggtcgcgggctttgtcgcgcgatgtggagaattcgcgcggctt
cacgggccgcgcttcgagccgcccgtctcgctcgttcgctgtgcccgggaggggcgctcg
cttgcggagacctactttaaacgcgctgaaagggaatcacaatga
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