Lysinibacter sp. HNR: FrondiHNR_03560
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Entry
FrondiHNR_03560 CDS
T09375
Symbol
sucC
Name
(GenBank) ADP-forming succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
lyh
Lysinibacter sp. HNR
Pathway
lyh00020
Citrate cycle (TCA cycle)
lyh00640
Propanoate metabolism
lyh00660
C5-Branched dibasic acid metabolism
lyh01100
Metabolic pathways
lyh01110
Biosynthesis of secondary metabolites
lyh01120
Microbial metabolism in diverse environments
lyh01200
Carbon metabolism
Module
lyh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lyh_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
lyh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
FrondiHNR_03560 (sucC)
00640 Propanoate metabolism
FrondiHNR_03560 (sucC)
00660 C5-Branched dibasic acid metabolism
FrondiHNR_03560 (sucC)
Enzymes [BR:
lyh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
FrondiHNR_03560 (sucC)
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
CPSase_L_D2
GARS_A
Motif
Other DBs
NCBI-ProteinID:
WGD38587
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Position
828607..829770
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AA seq
387 aa
AA seq
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MDLYEYQARDLFESYGVPVLPGIIADTPEDARAAAEKLGGVVVVKAQVKVGGRGKAGGVK
VAQNPDEAYSAAQDILGLDIKGHTVQRVMVAAGARIAQEFYFSVLLDRANRSYLSLTSFE
GGMEIEQLAVERPEALARIEINPNRGIDSAKAHEIAIAAQFPAELVEKVASVIAQLYEVY
TGEDATLVEVNPLVLTEEGHIVALDGKVSLDENAAFRHPSHETLEDKGASDPLEARAKEL
DLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEQHGGVKPANFLDIGGGASAKVMTDGLD
VILSDPQVKSVFVNVFGGITACDAVANGIVQALTVLGSSATKPLVVRLDGNKVEEGRAIL
AAANHPLITLATSMDDGADKAAALASR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
gtggatctttacgagtaccaggcacgagacctatttgaaagttatggggtgccggttctt
cccggcatcatcgctgacacccccgaggatgcccgtgcggccgctgaaaaactcggtggg
gttgttgttgtaaaggctcaggtcaaggtgggcggacgaggaaaggctggcggtgttaag
gtcgcccagaatcccgacgaggcatacagtgcggcgcaagatatccttggtctcgatatt
aaagggcatactgttcagcgtgtgatggtggcggccggtgcgcgtattgctcaggaattc
tacttctcggtcctcctagatcgagctaatcgttcatacctttcgctcacgagcttcgag
ggaggtatggagatcgagcaattagcggtggagcgccccgaggctctcgcccgcatcgag
atcaatcccaacagaggaatcgactcggcaaaggctcatgagatcgcgattgcggctcaa
tttcccgccgagttggtagaaaaagtggcgtccgttattgcgcagctctacgaggtgtat
acgggggaagacgctacgctcgtggaggtgaacccgttggttctcaccgaagagggtcac
atcgttgctcttgacggtaaagtgtcactcgatgaaaacgcggctttccggcaccccagc
cacgagacccttgaagacaagggggcatccgatccgttggaggcccgtgcaaaagagcta
gatcttaactatgtcaagcttgacggtgaggtggggatcatcggaaacggtgcgggcctt
gtgatgtcaacgctcgatgttgttgcgtatgcgggcgagcagcacggtggagtaaaaccg
gcaaactttctcgatatcggtgggggcgcatccgccaaggtcatgaccgacggactggat
gttattttgagtgacccccaggtgaaaagcgtttttgtaaatgtttttggtggtatcacg
gcgtgtgacgcggtggccaacggtattgtgcaggccctgacagtgctggggagcagcgcc
accaagcccctggttgtgcgccttgatggcaacaaagtggaagaggggcgtgcgattctt
gcggcggcaaatcatccccttattaccctggccacctcaatggacgatggtgccgataaa
gcggccgctctggcctctcgctaa
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