Lysobacter alkalisoli: FKV23_06585
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Entry
FKV23_06585 CDS
T06167
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lyj
Lysobacter alkalisoli
Brite
KEGG Orthology (KO) [BR:
lyj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lyj03009
]
FKV23_06585 (rimO)
Enzymes [BR:
lyj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FKV23_06585 (rimO)
Ribosome biogenesis [BR:
lyj03009
]
Prokaryotic type
ribosomal protein modification factors
FKV23_06585 (rimO)
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Ortholog
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GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
QDH69798
UniProt:
A0A514BQX0
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All DBs
Position
1506063..1507415
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AA seq
450 aa
AA seq
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MPIANPKVGFVSLGCPKALVDSERILTQLKAEGYDLVPSYDDADVVVVNTCGFIDSAVAE
SLDAIGEAMAENGKVIVTGCLGKREEVIREAHPGVLSISGPQDYGSVMGAVHKALPPKHD
PFTSLMPRRGSTEDDIGIKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDQVLR
EAEKLAMGGVKELLVISQDTSAYGVDLKYAEREWHGKAYQTRMKALCEGLAELGLWTRLH
YVYPYPHVDDIIPLMADGKLLPYLDIPFQHASPRILKLMKRPGAVDKTLERIQRWRAICP
ELTIRSTFIVGFPGETDEEFEQLLDFLEEAQLDRVGAFAYSPVEGAKANALPDPVPEELK
QERLARFMELQADISTARLEAKVGTTQRCIVDALDGELAIARSMADAPEIDGLVQIQNGF
EAGLKPGEFVDVEIMGSDEHDLYGEVAFEG
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcgccaatcccaaagtcggcttcgtcagcctcggctgtccgaaggcccttgtt
gattcagaacgcatcctcacccaattgaaggccgaggggtacgacctcgtgcccagctac
gacgatgccgacgtggtggtggtcaacacctgcggcttcatcgactccgccgtggccgag
tcgctggatgcgatcggcgaggcgatggccgagaacggcaaggtcatcgtcaccggctgc
ctgggcaagcgcgaggaggtgatccgcgaggcccatccgggcgtgctctcgatcagcggc
ccgcaggactacggcagcgtgatgggggcggtgcacaaggcgctgccgccgaagcacgat
ccgttcaccagcctcatgccgcggcgcggatcgaccgaggacgacatcggcatcaagctc
acgccgaagcattacgcctacctgaagatttccgagggctgcaaccatcgctgcagcttc
tgcatcatcccctcgatgcgcggcgacctcgtcagccgcccggtcgatcaggtgctgcgc
gaggccgagaaactggcgatgggcggggtcaaggagttgctggtgatctcgcaggacacc
tcggcttacggcgtcgacctcaagtacgccgagcgcgagtggcacggcaaggcgtaccag
acccggatgaaggcgctgtgcgaaggcctggccgaactcggcctgtggacccgcctgcac
tatgtctacccgtatccgcacgtcgacgacatcatcccgctgatggcggacgggaaactg
ctgccgtatctcgacatcccgttccagcacgccagcccgcgcatcctcaagctgatgaag
cgcccgggggctgtcgacaagacgctcgagcgcatccagcgctggcgcgccatctgcccg
gaactgaccatccgcagcaccttcatcgtcggcttcccgggcgagaccgacgaggagttc
gagcagttgctggacttcctcgaggaggcccagctcgatcgcgtcggtgcgttcgcctac
tcgccggttgagggcgccaaggccaacgcgctgccggatccggtgccggaagaactcaag
caggagcggctggcacggttcatggaactgcaggccgatatttccactgccaggctggag
gccaaggtcggcaccacccagcgctgcatcgtcgacgcgctcgacggcgagctggccatc
gcccgctcgatggccgacgcgccggagatcgacggcctggtgcagatccagaacggcttc
gaggccggtctgaagccgggcgagttcgtcgacgtcgagatcatgggcagcgacgagcac
gacctgtacggcgaggtcgcgttcgagggctga
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