KEGG   Lysinibacillus sp. PLM2: MTP04_21160
Entry
MTP04_21160       CDS       T09546                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
lyp  Lysinibacillus sp. PLM2
Pathway
lyp00740  Riboflavin metabolism
lyp01100  Metabolic pathways
lyp01110  Biosynthesis of secondary metabolites
lyp01240  Biosynthesis of cofactors
lyp02024  Quorum sensing
Module
lyp_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:lyp00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    MTP04_21160 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    MTP04_21160 (ribD)
Enzymes [BR:lyp01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     MTP04_21160 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     MTP04_21160 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD DUF6568
Other DBs
NCBI-ProteinID: BDH61986
LinkDB
Position
complement(2171082..2172185)
AA seq 367 aa
MKTDKDYMQLALDLAASAKGKTNPNPVVGAVLVKDGVIVGSGLHRKAGEPHAEVHAFNMA
GEHAKGATLYVTLEPCSHFGKTPPCANLVVKSKVARVVVATKDPNPAVAGRGIQLIKDAG
IEVEVGLLEDEAIKLNERFIHNMITNRPFVISKFAMTLDGKIATHTGHSKWITSEEARQH
VHQLRNEVDSILVGIGTVLADNPTLTTRLSEGKGKNPIRIILDSQLRIPLDSNVLKTSDA
KTIIITEKNENLNKVAELENKGVLVISVTKDENGLNLEEMLSALYNEGITDILVEGGGTV
NGSFLRRGLINKYYVYIAPKIIGGAHSKSPILGDDIDSMELATNLEFESYHQVGQDLMIV
AYPKKSN
NT seq 1104 nt   +upstreamnt  +downstreamnt
gtgaaaactgataaagattatatgcagttagcattagatttagcagcttcagctaaaggg
aaaacaaatccaaaccctgttgttggagctgtcctagttaaagacggtgtaattgtaggc
tcaggtttacaccgaaaagcgggggaaccacatgcagaagtgcatgcatttaatatggct
ggtgaacatgcaaaaggggctactctatatgttacattagaaccttgctcccattttgga
aaaacacctccatgtgcaaatctagttgtaaaatcgaaagtagcgagggtagttgttgca
acaaaggatccaaatccagctgtagcgggacgtggtatccaattgataaaagatgctggt
attgaagttgaggttgggttgcttgaagatgaggcaataaagcttaacgaacgttttatt
cataatatgattacaaatcgaccgtttgtcatttcaaagtttgcaatgacacttgatggg
aaaatcgctacacacacaggacactcaaaatggattacaagtgaggaagcaagacagcat
gtacatcaattacgtaatgaagtagattcaattttagttggcatcggtacagttcttgct
gataatccaacactaacaacgcgtttgtctgaaggtaaagggaaaaatccaataagaatt
atactagatagtcagttgcgtattcctttagattccaatgtgttgaaaacaagtgatgct
aaaacaattattattacagaaaaaaatgaaaacctaaataaagttgcagaactagaaaat
aagggcgtattagttattagtgttacaaaagatgagaatggtttaaatttagaagaaatg
ttatcagccttatataatgaaggaatcacagatattttagtagaaggtggaggaacagta
aatggctccttccttagacgaggtctaattaataaatattatgtatacattgcccccaaa
ataatagggggtgctcattcaaaatcacctatccttggtgatgatatagatagcatggaa
ttagcgacgaatcttgaatttgaatcctatcatcaagttggacaagatttaatgattgtc
gcctatccgaaaaaaagtaattag

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