Microvirgula aerodenitrificans: DAI18_10635
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Entry
DAI18_10635 CDS
T09834
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
maer
Microvirgula aerodenitrificans
Pathway
maer00540
Lipopolysaccharide biosynthesis
maer01100
Metabolic pathways
maer01250
Biosynthesis of nucleotide sugars
Module
maer_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
maer00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
DAI18_10635 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
maer01005
]
DAI18_10635 (rfaD)
Enzymes [BR:
maer01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
DAI18_10635 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
maer01005
]
Core region
DAI18_10635 (rfaD)
BRITE hierarchy
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
KR
Motif
Other DBs
NCBI-ProteinID:
AVY94453
UniProt:
A0A2S0PAW3
LinkDB
All DBs
Position
2253250..2254239
Genome browser
AA seq
329 aa
AA seq
DB search
MYTVVTGAAGFIGANLVHALNARGERNIIAVDDLTDGPKFRNLVDCDIAHYVDKDQFIEM
LLDGVWDGEIRAILHQGACSDTMEHNGKFMMENNYQYSVSLLEYCQQDAIPLLYASSAAV
YGGGQVFREERGFESPLNVYGYSKFLFDQVVRKRMQNGLTAQVAGFRYFNVYGPREQHKG
RMASVAFHHFNQYRDTGKVKLFGSYDGYEAGMQSRDFVSVEDVVRVNLHFLDHPESSGIW
NLGTGRAEPFNNVALAAVNACRRQQGEAEMTLEQMIAAGIVEYIDFPDALKGKYQSYTCA
DIGALRAAGYADEFLTVADGVARYADALR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtataccgtcgttaccggtgccgcaggctttatcggcgccaacctggtccacgcactg
aatgcgcgcggcgaacgcaacattatcgcggtcgatgatctgaccgatggccccaaattc
cgcaatctggtcgattgcgacatcgcccattacgtcgacaaggaccagtttatcgagatg
ctgctcgatggcgtctgggacggcgagatccgcgcgatcctgcaccagggcgcgtgctcc
gacaccatggagcacaacggcaagttcatgatggagaacaactaccagtattcggtcagc
ctgctcgaatactgccagcaggacgccatcccgctgctgtacgcgtccagtgcggcggtg
tacggcggggggcaggtgttccgcgaggaacgcggcttcgaaagcccgctgaatgtctac
ggctactcgaaattcctgttcgaccaggtcgtgcgcaagcggatgcagaacgggctgacc
gcccaggtcgccggcttccgctacttcaacgtctatggcccgcgcgagcagcacaagggg
cgcatggcttcggtggccttccaccacttcaaccagtatcgcgacacgggcaaggtgaag
ctgttcggcagctacgatggctatgaagccggcatgcagagccgtgacttcgtgtcggtg
gaagacgtggtcagggtcaacctgcacttcctcgatcacccggaatcgtccggcatctgg
aacctgggcaccggccgagccgaaccgttcaacaatgtggcgctggcagcggtcaacgcc
tgccgccgccagcagggtgaggcagaaatgacgctggagcagatgatcgctgccggcatc
gtcgagtacatcgacttcccggacgccctgaagggcaagtaccagagctacacctgcgcc
gatatcggcgcgctgcgtgcggccggctacgctgacgagttcctgaccgtcgccgatggc
gtggcccgctacgcggacgcgttgcgctga
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