Magnetospirillum sp. XM-1: XM1_1095
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Entry
XM1_1095 CDS
T04231
Symbol
ligB
Name
(GenBank) Protocatechuate 4,5-dioxygenase beta chain(Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B,1-277)
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
magx
Magnetospirillum sp. XM-1
Pathway
magx00362
Benzoate degradation
magx00627
Aminobenzoate degradation
magx01100
Metabolic pathways
magx01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
magx00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
XM1_1095 (ligB)
00627 Aminobenzoate degradation
XM1_1095 (ligB)
00624 Polycyclic aromatic hydrocarbon degradation
XM1_1095 (ligB)
Enzymes [BR:
magx01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
XM1_1095 (ligB)
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Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
CUW38164
UniProt:
A0A0U5MBM8
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Position
I:1062408..1063247
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AA seq
279 aa
AA seq
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MAKIVGGINVTHVPYLGRAIAGNLQQEPYWKPFFDGFPPVQAWLDKVKPDVAVVVYNDHG
LNFFLDKMPTFAIGAAPEYHNADEGWGIPTVAPFAGDVDLSWHLVDQLIEAEFDLTTCQE
MLVDHAFTLPIEMLWPERGPKTIRTVPICQNTVQFPLPSPKRCLAFGRAIGKAIEAWDSD
ARVVVLGTGGLSHQLDGKRAGFINKKFDLEFMDKLVTDPDWISQYSVPDIVELTGTQGVE
LLNWVTCRGALGDKVRTVHTNYHIPISNTAAGLLAMETV
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcgtcggcggcatcaacgtcacccatgtgccctatttgggccgcgccatc
gcgggcaacctgcagcaggagccctattggaagcccttcttcgacggcttcccgccggtc
caggcctggctcgacaaggtcaagccggacgtggcggtggtggtctacaacgaccacggc
ctgaacttcttcctcgacaagatgcccaccttcgccatcggcgccgcccccgagtaccac
aacgccgacgagggctggggtattcccaccgtggcccccttcgccggagacgtggacctg
tcgtggcatctggtcgaccagctgatcgaggcggaattcgacctcaccacctgccaggaa
atgctggtggaccacgccttcaccctgcccatcgaaatgctgtggccggagcgcgggcct
aagaccatccgcaccgtgcccatctgccagaacaccgtgcagttcccgctgcccagccct
aagcgctgcctggccttcggccgcgccatcggcaaggccatcgaggcgtgggatagcgac
gcccgcgtggtggtgctgggcaccggcggactgtcgcaccagctggacggcaagcgggcc
ggcttcatcaacaagaagttcgacctggaattcatggacaagctggtcaccgatcccgac
tggatcagccagtattccgtccccgacatcgtcgagctgaccggcacccagggcgtcgag
ctgctcaactgggtcacctgccgcggtgcgctgggcgacaaggtccggaccgtccacacc
aactaccacatccccatctccaacaccgccgccggcctgctggccatggagacggtgtag
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