Monopterus albus (swamp eel): 109951109
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Entry
109951109 CDS
T05607
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03020
RNA polymerase
malb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109951109 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
109951109 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
malb03021
]
109951109 (polr2b)
03400 DNA repair and recombination proteins [BR:
malb03400
]
109951109 (polr2b)
Enzymes [BR:
malb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109951109 (polr2b)
Transcription machinery [BR:
malb03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
109951109 (polr2b)
DNA repair and recombination proteins [BR:
malb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
109951109 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
109951109
NCBI-ProteinID:
XP_020441058
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDQDEDNQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTAECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPENEDELDSTNRRYIKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRLPYACKLLFQELMSMSIAPRMMAS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaccaggacgaagataatcaatacgatgaagatgatgatgaaatcactccagat
ttgtggcaggaagcatgctggattgtcatcagctcttattttgacgagaagggtttggtg
cgacagcagctggattcgtttgacgagttcatccagatgtcggttcagaggatcgtggag
gatgcgccacccatcgacctgcaagctgaagcccaacacacttcaggggaggtggaagag
ccgcctcgttacctgctgaagtttgagcagatctatctgtccaagcccacccactgggag
agagatggagctccttctcccatgatgcccaatgaagcccgacttcgaaacctcacgtac
tcggcacccctgtatgttgacatcacaaagaccattataaaggagggggaggaccagctg
cagacccaacaccagaagaccttcattggtaaaattcccatcatgcttcgctccacctac
tgcctgctgagcggtctgacggaccgagacctgtgtgagctcaacgagtgtccactcgac
cctggaggttatttcatcatcaacggctctgagaaggtactgattgctcaggagaagatg
gccaccaacacggtgtatgtctttgccaagaaggactccaagtatgcctacacagccgag
tgtcggtcctgtttggaaaactcgtcgcgtcccactagcaccatatgggtcagcatgatg
gccagaggaggacagggagtaaagaagagtgcgattggtcagaggattgtatccacgctg
ccctacattagacaggaagttcccatcatcatcgtttttcgagctctgggctttgtgtcg
gacagagacatcctggaacacatcatctacgactttgatgaccccgagatgatggagatg
gtgaagccgtctttagacgaagcatttgtgatccaggagcagaatgtggcattgaacttt
attggttccagaggagcgaaacctggagtgacaaaagaacgaagaatcaaatacgccaaa
gaagttctgcagaaagaaatgcttccgcatgttggagtcagcgacttctgtgagaccaag
aaggcttacttcttagggtacatggtccacaggttgctgctcgctgcccttggcagaagg
gagctggatgacagagatcactacggcaataagaggctcgacctcgccgggccattgttg
gccttcctgttcagaggtatgtttaagaacctgctgaaggagatcaggatttatgctcag
aagttcatcgacagagggaaagactttaatctggagctcgccattaaaaccagaatcatc
tcagatggactcaaatactctctggccaccggaaactggggtgacgtgaagaaggctcac
caggcccgagctggggtgtctcaggtgttgaaccgtctgacctttgcatccactctgtcc
cacctccgccgagtgaactctcccattggcagagatggcaaactggcaaaacccagacag
ttgcacaacacgctgtggggaatggtgtgtccggccgagacacccgagggtcatgctgtg
ggtctggtgaagaacttggccctcatggcctacatctctgtgggctcacagccatctccc
atcctggagtttctggaggagtggagtatggagaacctggaggagatatcacccgctgcc
attgcagatgccactaagatctttgtgaatggctgctgggttggaatccataaagatccc
gaacagctgatgaacacactgaggaagctccgcagacagatggatataatcgtgtccgag
gtgtcgatgattagagacatcagagaacgtgagatcagaatttacacagatgctggacga
atctgccgaccactgctgatcgtcgagaaacaaaagctactgctgaagagacgacacatc
gaccagctgaaggagagggaatacaacaactacagctggcaggacttggtggcgagcggt
gtagtggagtacatcgacaccctggaagaggagacagtgatgctcgccatgaccccagat
gacctccaggagaagggcgtggcctactgctccacctacacccactgtgagatccacccg
tccatgatcctcggagtctgtgcctccatcatccccttccccgaccacaaccagtctccc
aggaacacgtaccagtctgctatgggtaaacaggccatgggcgtctacatcacgaacttc
catgtacgtatggacacgctggctcatgtgttgtactatcctcagaaaccactggtcacc
acccgatccatggagtacctgcgcttcagagagctgcctgcaggtatcaactccatcgtg
gcgatcgcctcttacacaggatacaatcaggaggattctgtaatcatgaacaggtcggct
gtggatcgaggcttcttcaggtctgttttctataggtcctacaaagagcaggagtcaaag
aaaggttttgatcaggaagagatctttgagaagccgacaagagaaacctgtcaaggaatg
agacacgccatctatgacaagttggacgacgacgggctgattgcacctggcgttcgtgtg
tcaggtgaggatgtgatcattggcaagacagtaacgctgccagagaatgaagacgagtta
gacagcaccaaccggcgctacatcaagagagactgcagcaccttcctcagaaccagtgag
accggcattgtggaccaggtgatggtgaccctaaaccaggagggctacaagttctgcaag
atcagggttcgttcagttcgtattcctcagatcggagacaaattcgccagccgacatggg
cagaaaggaacctgcgggatccagtacagacaagaggacatgccgttcacctgtgaggga
atcacacctgacattatcatcaatcctcacgccatcccgtccagaatgacagtcggtcat
ttgatcgagtgcttgcagggcaaggtgtctgccaacaaaggtgagattggcgatgcaaca
ccatttaatgatgctgtcaacgtgcagaaggtgtcgaacctgctgtctgaatacggatac
cacctgagaggaaatgaggtcctgtataatgggttcacggggaggaagctgacatctcag
atcttcatcggtccgacatattatcagcgtctcaagcacatggtggatgataagatccac
tcgagggcccggggccctgtccagatcctcaacagacagccgatggagggacgatcacgt
gatggtggtctgcgttttggggagatggagcgtgactgtcagatcgctcacggagcggcc
cagttccttagagagcgtctgtttgaggcatctgatccatatcaagttcatgtctgtaac
ctgtgcggactgatggccatcgccaacacacgaacacatacgtacgagtgtcgaggctgc
cgcaacaagacacagatctctctggtccgcttgccgtatgcctgtaaacttctgttccag
gagttgatgtcgatgagcatcgctcctcgtatgatggcttcatag
DBGET
integrated database retrieval system
