Monopterus albus (swamp eel): 109957518
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Entry
109957518 CDS
T05607
Symbol
polr1a
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109957518 (polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
malb03021
]
109957518 (polr1a)
Enzymes [BR:
malb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109957518 (polr1a)
Transcription machinery [BR:
malb03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
109957518 (polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
HMG_box
Nop14
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
109957518
NCBI-ProteinID:
XP_020451102
LinkDB
All DBs
Position
Unknown
AA seq
1683 aa
AA seq
DB search
MFFGKEVPWRRLEGMSFGMYSSEEIRKLSVKAITNFRFLDGVGNVAPNSLYDLALGPADN
KEVCSTCCQDFNNCPGHLGHVELPLPVYNPLFFDKLYLLIRGSCLVCHMLTCPRAAIHLL
LNQLTLVDLGAMQEVYQAEQVLNHYLEENPTATGDEIQQVLKEFINTVIGVNTEGSENIK
PIKHLVEKKTSLINDFWKIHIKSRKCPFCRSGRFTVRREHNSKLIVTAPAGVKTSTGDTD
ALDLTDGKRVYLTASTAREHTIQLWEKEGFFLKCLFSGLEEGQKGFWPDLFFLDLLVVPP
CRYRPINRLGDQMFTNSQTVNMQAVMKDCVIIRKLLALIAGEKDTQEEEAPEQTDQSFLS
GIPGQTLTDKLYNIWIRLQSHVNIVFDSDMDKLMTEKYPGIRQILEKKDGLFRKHMMGKR
VDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVLNGPSVHPGASM
VINEDGRRTILSATSFAQREAVAKQLLTPCPGPHKMPMKIVNRHIKNGDVLLLNRQPTLH
RPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELARAEAYTLVSTDQQ
YLVPKDGKPLAGLIQDHMVSGTRMTIRGCFFTRDQYTELVYRGLTDKPGRVKLLPPAILK
PRLLWTGKQVVSTLLLNVIPHNAVPLNLVGKSKIPSKAWIQVPPRAAPGYRPDSMCDSQV
VIRQGELLVGVLDKAHYGSSAYGLVHCCYELYGGETSGKLLSSLARLFTAYLQLYRGFTL
SVEDILVKSGANKQRKKIIKTSLKIGTKALHAAFNLPSSVDQAEARSRWQDAHLNPDQRD
FTMADHKFKEVANQVNNDINKVCMPAGLHTSFPDNNLQLMVQSGAKGSTVNTMQISCLLG
QIELEGRRPPLMPSGKFLPCFQPYDPSPGAGGFVSGRFLTGIKAQEFFFHCMAGREGLVD
TAVKTSRSGYLQRCIIKHLEGLVVQYDMTVRDSDGSVVQFLYGEDGLDIPKTQFLQPRQF
PFIEDNYEVIKRSQGLDEVLERLDLQSASQHYAAIQRWKAKRETACPRRGAFLLFSQKKL
AKLKRTEHGTEPAVYNRELIQQWRSLDEVSRSKYRRKSSRCPEPSLGIFRPDVCFGSISE
NFHDITEKYLQSRGQSQDSLDTHSLRQLFHYKWQRSLCNPGEAVGLLAAQSIGEPSTQMT
LNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTPMMSVPVLNNERALNRAKTLRKKLNR
VYLAEVLHKVNVVETLRIASHEKQRAFKVTFHFLPAQRYCDDKLLSPHQILHYMETRFFR
LLLEAIKKRSAKLASIVVETRKATPRDKDHDGDGTGDTAGVDDLEGEEEREIVDDQGNEG
DADASDAKRKGKQEEEVDYESEEEDERGSAEDKEDQGEEEEEESAEDQALDKAQAESAGV
RVERKAKREKGGGKGKEDTLKQIRVNSVLDSNQAIERYSYDHKHELWCEVDLVLPLTKVH
FDLTSVLSALAQNAVIMETKGLTRCLLSETTTKMGEKETILNTEGINMHEMFKHSDILDI
NRLYSNEIHAMANTYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGVYKPL
NRHAIRSNSSPLQQMTFETSYKFLKQATMLGSHDQLVSPSACLVVGKVVKGGTGLFELKQ
PLQ
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgttttttggaaaagaagtgccatggcggcgtttggagggcatgtcgtttggcatgtac
tcttcggaagagataaggaagctgagtgtgaaggcgatcactaacttcagattcctcgat
ggtgttgggaatgtggccccgaacagcctgtacgacctggccctgggaccagcagacaac
aaagaggtttgttcaacttgctgtcaggacttcaacaactgtccaggccacctgggacat
gtagagctacctctgcctgtatacaacccgctgttctttgataaactctacctactgatt
cggggttcgtgtctggtgtgtcacatgttaacctgtccccgagctgccatccacctgctg
ctcaaccagctcacgttagtggacctcggagccatgcaggaggtctaccaagcagagcaa
gttctcaatcattacctggaggagaatcccacagccactggagatgagattcagcaggtg
cttaaggagtttataaacacggtaattggagtgaacactgaaggttcagagaacatcaaa
ccaattaaacacctggttgaaaagaaaaccagcctgataaatgacttctggaagatccat
attaaatctaggaaatgtcctttctgcaggagtggtagattcacagtgcgtcgtgaacac
aacagtaagctgattgtcacagcgccggcaggggtaaagaccagtactggtgatactgat
gcactagatctgacggatggtaagagagtctacctgactgctagtactgctagagaacac
accatccaactgtgggagaaagaaggtttctttctgaagtgtctgttctctgggctggag
gagggacagaaaggtttctggcctgacttgttcttcttagacctgctcgtggtcccacct
tgcaggtatcgccccatcaatcgactgggtgaccagatgtttaccaacagtcagacagtc
aacatgcaggctgtcatgaaggactgtgtaatcataaggaaacttctggctctcattgca
ggagagaaagatactcaggaagaagaggctcctgaacagaccgaccagtcatttctctct
gggatccctggacagactttaacagataaactctacaacatctggatccgactacagtcc
cacgtcaacattgtttttgacagtgacatggacaaactgatgactgaaaagtaccctgga
attagacagatcctggagaagaaggacggattgttccggaaacacatgatgggcaaacga
gtggactatgcagcacgatctgtcatttgtccagacatgtacataggaaccaacgagata
ggaatacctatggtgtttgccaccaagctgacgtaccctcaacctgtcactccatggaac
gtgaaggagcttcgccaggccgtccttaacgggcccagcgtccaccctggtgcttccatg
gtgataaacgaggatggcaggagaaccatcctatcagctactagctttgcacagagagaa
gcggttgctaagcagctgctgacaccctgtcctggtccacataagatgccaatgaagata
gtgaatcgtcatataaaaaatggagatgttttgttactcaacagacaaccaactctacac
agaccctccatacaggcccactgtgcccgcatcctaccaggagagaaggtactaaggctc
cattatgccaactgcaaggcgtacaatgctgactttgatggagatgaaatgaatgctcac
ttccctcagagcgagctggccagagcagaggcctatacgttagtcagcacggaccagcag
taccttgtccccaaggatggtaaacctttagcgggtctgatccaggaccacatggtgtca
ggaacgaggatgacgatacgaggatgtttcttcaccagagaccagtatacagagttggtg
tacagaggactgacagacaaaccaggtagagtcaagctgctgccgccagccatactcaaa
ccacggctgctatggacaggaaaacaggtggtttctacgcttctgctaaatgtgatccca
cacaacgctgtgcctctcaatctggtgggcaaatcaaaaattcccagcaaagcatggatc
caagtcccgccacgtgcagctccgggatacagacctgacagcatgtgtgactcacaggtg
gtgattcgtcagggggagctgttggtgggggttttggacaaagctcactatggctcttca
gcctacggcctggtccactgctgctatgagctgtatggaggagagactagtggcaaactg
ctcagctctctggcccgacttttcactgcttacctgcagctctacagaggctttaccctg
agcgtggaggacatcctggtgaaatcgggcgccaataagcagaggaaaaaaattattaag
acgtctctgaagattggcaccaaagcccttcatgcagcgttcaacctgccctccagcgta
gatcaagctgaggctcggagtcgctggcaggacgctcacctcaacccagaccagagagac
ttcaccatggctgaccacaagttcaaagaagtggccaatcaagtgaacaatgatatcaac
aaggtgtgtatgccagctggactccacacctctttcccagacaacaatctccagctgatg
gtccaatcaggagccaaggggtcgactgttaacaccatgcagatttcctgtctactaggt
cagattgagttggagggccgcaggcctcctctgatgccttctggaaaatttttgccatgc
ttccagccatatgacccttcacctggcgctgggggctttgtctctggaaggttcctcaca
ggcatcaaagcacaggagttcttcttccactgcatggctggcagagagggactggtcgac
acagctgtgaaaacatctagatcaggatacctgcagagatgcatcataaagcatctggag
ggtttggtagtacagtatgatatgacagtgagggacagcgatggatcagtggtccagttc
ctgtatggtgaggatgggctggacatcccaaagactcagttccttcagccacgacagttc
ccattcatagaggacaactatgaggtcatcaagaggtcccagggcctggatgaggtttta
gaacgtttggaccttcagagtgccagtcagcactatgcagccatccagcgctggaaagca
aagagagagacagcatgtccacggagaggtgcgttcctgttattttcccagaagaagtta
gccaaactaaaacgaactgaacatggaacagagccagctgtgtacaacagagagctcata
cagcagtggcgctctctggatgaagtaagcagatcaaaatacaggaggaagtcctcccgc
tgtcctgaaccatctctgggtatatttaggccagatgtctgcttcggatctatttctgaa
aactttcatgacatcacagagaaatacctgcagagcagaggccagagtcaggacagcttg
gatacacacagccttcgccagctgtttcattataagtggcagcgttcactgtgcaaccct
ggtgaagcagtgggtctcctggcagctcagtccataggcgaaccctccacccagatgacc
ctcaataccttccactttgctggcagaggagagatgaacgtcactttgggaatccctcga
ctgagggagatcctgatggtggccagctccaacattaaaactcccatgatgagtgtccca
gtgctaaacaacgagagagccttaaacagggccaagacgctccgtaagaaactcaacagg
gtgtatctggctgaggtgctgcacaaggtgaatgtggtagagactctgcggattgcaagt
cacgaaaagcagcgcgctttcaaagtcaccttccactttcttcctgcacagcgctactgt
gatgacaagctgctgtcgcctcaccaaatcctccactacatggaaacaaggtttttccgt
ctcctccttgaagccattaagaagcgcagcgccaaactggcctccatcgttgtagagacg
aggaaggccactccccgagataaagaccatgatggtgatggaacgggtgacacagcaggg
gtagatgatttggagggagaggaggagagagagattgttgatgaccaagggaatgaagga
gatgccgacgcttcagacgccaagagaaaaggcaagcaggaagaggaggtggactatgag
agtgaggaggaagatgaacgtgggagtgccgaagataaagaagatcagggggaggaagag
gaggaggagagtgcagaggaccaggcactggacaaggctcaggcagagtctgcaggagtg
agggtggaaaggaaggcaaaaagagaaaaaggaggaggaaaaggaaaagaagacaccttg
aaacagataagagtgaactctgttctggactccaaccaggcaatagagagatactcctat
gatcacaagcacgagctctggtgtgaggttgacctggtcttgccattgaccaaggtgcac
ttcgacctgacctcagtcctgtcagcactggcccagaatgctgtaattatggaaaccaag
ggcctgactcgctgcctgttaagtgaaactacaacaaagatgggggaaaaagagacgatt
ctcaatacggagggcatcaacatgcacgaaatgttcaagcacagtgatatcttggacatc
aacaggctctactccaatgagatccatgccatggccaacacctatggcattgaagtagct
ctgaaggtcatagagaaggagataaaggatgtctttgctgtctacggtattgaggttgac
cccagacatttgtcactggtagcagactacatgtgttttgaaggtgtatataagccatta
aaccggcacgccatcaggtccaactcatcccccctgcagcagatgacctttgagacaagc
tacaaattcctcaagcaggccaccatgctggggtcgcacgatcagctggtgtcaccctca
gcctgcctggtggtggggaaggtggttaaaggtggaacaggactgtttgaactgaaacaa
cctctgcagtag
DBGET
integrated database retrieval system
