Marinobacter alkaliphilus: PBN92_03495
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Entry
PBN92_03495 CDS
T08753
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
mall
Marinobacter alkaliphilus
Pathway
mall00540
Lipopolysaccharide biosynthesis
mall01100
Metabolic pathways
mall01250
Biosynthesis of nucleotide sugars
Module
mall_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mall00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PBN92_03495 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mall01005
]
PBN92_03495 (rfaD)
Enzymes [BR:
mall01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
PBN92_03495 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
mall01005
]
Core region
PBN92_03495 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
Gp_dh_N
DUF6716
Motif
Other DBs
NCBI-ProteinID:
WBU41977
LinkDB
All DBs
Position
764990..765931
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AA seq
313 aa
AA seq
DB search
MIVVTGGAGFIGANIIHALNSRGETDILVVDDLTDGTRFRNLAELDVTDYMDKGEFLERV
KANDLPVGIRAIFHEGACSDTTEWDGKFMMENNYTYSKVLLHWCLDRKVPFLYASSAAVY
GASDEFREERECERPLNVYGYSKWQFDQYVRKILPSARCQVVGFRYFNVYGPREQHKGKM
ASVAYHLHEQIKAGQNPKLFEGWDGYSDGGQQRDFVYVDDVCKVNLWFYDNPEQSGIFNL
GTGRAQSFLDVAEAVIRYHGKGSVEFIPFPDELKGRYQSFTQADITALRDVGYTAEFADV
ASGVESYLAWLDR
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcgtcactggcggtgccggtttcattggagccaacattattcacgcccttaac
tcgcgtggcgaaaccgatattctggtggtggacgatctgaccgacggtacccgtttccgg
aacctggcggagctggatgtcacggattacatggacaaaggcgagttcctggagcgggtc
aaagcgaatgacctgccggtgggtataagggccatcttccacgagggggcctgttcagac
accaccgagtgggatggcaagttcatgatggagaacaactacacctactccaaggtgttg
ttgcactggtgccttgatcgcaaggtgccgttcctctatgcgtccagtgccgccgtctac
ggagccagtgatgaatttcgcgaagagcgcgagtgcgagcgaccgcttaacgtttacggt
tattccaagtggcagtttgaccagtacgtgcgcaagattctgccctccgcccgttgccag
gttgttggtttccgctacttcaacgtgtatggcccgagggagcagcacaagggcaagatg
gcgtccgtggcctatcacctgcatgaacagatcaaggccggccagaaccccaagctgttc
gaggggtgggatggatactctgatggtggtcagcagcgggatttcgtttacgtggatgat
gtctgcaaggtcaacctctggttctacgacaaccccgaacaatccggcattttcaacctg
ggtacagggcgcgcccagtcgtttctggatgtggcagaggctgttatccgctaccacggc
aagggcagtgttgagttcattcccttcccggatgagttgaaagggcgctatcagagcttt
acgcaggccgatattaccgctttgcgtgatgttggctacaccgctgagtttgctgatgtg
gccagcggtgttgagagctatctggcctggctggaccgatga
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