Megalobrama amblycephala (Wuchang bream): 125255153
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Entry
125255153 CDS
T08212
Symbol
prdm9
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb00310
Lysine degradation
mamb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125255153 (prdm9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125255153 (prdm9)
03036 Chromosome and associated proteins [BR:
mamb03036
]
125255153 (prdm9)
Enzymes [BR:
mamb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
125255153 (prdm9)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
125255153 (prdm9)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
125255153 (prdm9)
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
125255153 (prdm9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_3rep
Zn-ribbon_8
zf-met
Motif
Other DBs
NCBI-GeneID:
125255153
NCBI-ProteinID:
XP_048026138
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All DBs
Position
LG20:complement(8568808..8573684)
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AA seq
861 aa
AA seq
DB search
MSDSPDLPPSDEHTLEIQGSVTNCSGVMMEEQQDSMFNDQHFYCEMCHQHFIDQCEVHGP
PLFTCDSPAAMGIPQRALLTLPQGLVIGRSSISNAGLGVFNQGQTVPLGMHFGPFDGEVT
CEEKALDSAYSWVIYRGNNQYSYIDAERDTHSNWMKFVVCSRSETEQNLVAFQQNGRILF
RCCRPISPGQEFRVWYAEEYAQGLGTIWDKIWNKKCISLGTTEEQATQDCPCPHCHYSFP
TIFYLRVHVKRSHPDQYVHFMQTQPLESEDHSTVIDVDQCLLDSDAAPPTHTQPMTESCQ
GQISTLNGQPMNHSKKSDCTDLSETCSNGLSDQANCATEISDEINKCGECGRNFLRSCHL
KRHQRTIHSKEKPYCCSHCRKCFSQATGLKRHQQTHQGEEKKEKDADRPSDIYPCTKCSF
SFVAKFNLYQHLKRHHHGEYLRLVESGSLTAGTEGDTEINSDKHDPTYEPPTRLRRSPKN
PLRGRSCPKKVPVGRSRGRPPKNKQAAEVEVQKSLPICTECEQSFSDLETLKTHQCAGQD
HNKMEEPQEAPASQHVCGECLRAFSNFDLLKAHECIQQGDGSYCCSHCNLYFNRMCNLRR
HERTIHSKEKPYCCTVCLKSFTQSSGLKRHQQSHSRRKTHRQSSALVNANIFPCTYCPFS
FTDERYLYKHIRRHHPEMSVKYLSFQEGGVLSVEKPHSCSQCCKSFSTIKGFKNHSCFKQ
GEKVYLCTDCGKAFSWFNSLKQHQRIHTGEKPYTCQQCGKSFVHSGQLNVHLRTHTGEKP
FLCSQCGESFRQSGDLRRHEQKHSGVRPCQCPDCGKSFSRPQSLKAHQQLHNGTKLFPCT
QCGKSFTRRYHLTRHHQKMHS
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagtccggatttgccaccaagcgatgagcatactttagagatacaaggctct
gttactaattgttctggtgtgatgatggaggaacagcaggatagcatgtttaatgaccaa
catttctactgtgagatgtgtcaccagcacttcatagaccaatgtgaggttcatggtcca
ccattatttacatgtgactcaccagcagctatgggcattcctcagagagctctgctaaca
ctgccacaaggcttggttataggtcggtcaagcatctctaatgcaggacttggggttttc
aaccaaggccagactgtgccattggggatgcattttggaccttttgatggagaggtaacc
tgtgaggagaaggcattggatagtgcctactcttgggtaatttacagaggcaataatcaa
tatagttacatagatgcagagagggacactcactctaactggatgaagtttgtggtgtgt
tcaaggagtgagacggaacagaatcttgttgcattccagcaaaatggacgtattctgttc
cgttgttgtcgccctattagccctgggcaggaatttagagtttggtatgctgaggaatat
gctcaaggacttgggaccatctgggataaaatctggaataagaaatgcatttctctaggt
acaactgaagaacaggcaactcaggactgcccatgtcctcattgccattactccttccca
actattttttatctgcgtgttcatgtgaagcgctcacatcccgatcagtatgtgcacttc
atgcagacacagccgcttgagtctgaagaccactcaacagttatagacgtagaccagtgc
cttctggactctgatgcagctcctccaacccatacacagccaatgacggaaagctgtcag
ggtcaaatttcaaccctaaatggacaacccatgaatcactcaaaaaagtcagactgcact
gatttgtccgaaacatgcagtaatggattgagtgaccaggcaaactgtgctactgagatc
tcagatgaaataaataaatgtggtgagtgtggccggaactttttgagatcttgtcatctg
aagagacatcaacgcactattcactctaaagagaaaccttattgctgcagccattgtagg
aagtgttttagtcaagcaacaggtctgaaaagacaccaacaaacccaccagggagaagaa
aagaaagaaaaagatgcagacagaccttctgacatatatccttgcactaagtgctccttc
tcttttgtggccaaattcaatttatatcaacatctcaaacgccatcaccatggagagtac
ctcagattagttgagagcggctcgctcacagcaggaactgagggtgatacagagataaat
tctgacaagcatgacccaacctatgaacctcccactcgattgaggaggtctccaaagaac
cctctgagaggcaggagttgccctaaaaaagtgcctgttggccgatcacggggccgacca
cctaaaaataagcaagcagctgaggttgaagtgcagaagagtttacctatctgcactgag
tgtgagcaaagtttctctgatttggagacattgaaaactcaccaatgtgcaggacaagat
cataataagatggaggaaccacaggaagcaccagcttcccagcatgtctgcggtgaatgc
ctgagagctttcagtaattttgatcttctcaaagcccatgagtgcattcaacagggagat
ggatcttactgttgctcccactgcaacctttacttcaaccgtatgtgtaaccttcgtcgc
catgagcgcactatccactccaaggagaagccctactgttgcacagtgtgcctcaagtcc
ttcacccagtcttctggcttgaagcgccaccagcagagtcattcacgccgcaaaacccac
cgccagagctcggccctggttaatgccaacatctttccctgcacatactgccccttctcc
ttcactgatgagcgatatctttacaaacacatccgccgtcaccacccagaaatgagtgta
aaatatctgagtttccaagaagggggtgttttgtctgttgaaaagcctcacagctgcagc
cagtgctgcaagagctttagcacaatcaagggcttcaagaatcacagctgcttcaagcag
ggagagaaggtgtatctgtgcacagattgcggtaaggccttcagctggtttaatagcctc
aagcaacatcagcgcatccacacaggagaaaaaccctacacgtgtcagcagtgcggaaag
agttttgtccactctgggcaactgaatgttcacctccgcacacacacaggtgaaaaacct
ttcttgtgttcacagtgcggcgaaagcttcaggcagtcgggagatttgaggaggcatgaa
cagaagcactcaggcgttcgaccatgccagtgccctgattgtggaaaaagctttagtcgg
ccacaaagtctcaaagctcaccaacagcttcataatggcaccaaacttttcccctgcact
caatgtggaaaaagctttactcgtagataccatctcacccggcatcatcaaaaaatgcac
tcctga
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