Megalobrama amblycephala (Wuchang bream): 125277243
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Entry
125277243 CDS
T08212
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125277243 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamb03021
]
125277243 (polr1b)
Enzymes [BR:
mamb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125277243 (polr1b)
Transcription machinery [BR:
mamb03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
125277243 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
125277243
NCBI-ProteinID:
XP_048061548
LinkDB
All DBs
Position
LG10:27056908..27077846
Genome browser
AA seq
1132 aa
AA seq
DB search
MDLSKWCNLKPEPSLKHLTEAGFGVPKNKQHVPVQELVKAHIDSFDQAVTDGLCRVVEGI
PPLEFMYRGDRVSLSFVEAIIHPPAIAKGGISRDVRVFPAECRGRRCTYKGKLVADVSWS
INGIPKGIIKQALGQLPIMVKSKLCNLHGLSPKELIQHHEEAEEMGGYFLVNGIEKVIRL
LIMPRRNYPITISRPKFKTRGPGYTQYGVSMHSVRDEHTAVNMNLHYLENGTVMVNFIYQ
KELFFLPLGFALKALVDYSDYQIYQELIKGREENSFFKSCVSEILRIVMDQGCTTKAKVL
RFLGERFRVKLNLPEWYTHEQCAHFLLDECLCIHLKSDVEKFYMLCMMTRKLFSFAKQEC
MEENPDSLMFHEVLTPGQIYLMFLKERMAGWLVSVKYAMDKRSEKLGALTGDTITKIFNK
ATDLTKAFEYMLATGNLQSKTGLGLLQNTGLCVVADKLNFIRYLSHFRCVHRGASFAKMR
TTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAHSEIVTQVHPTTTLPALLCSLGVTAV
DGTPGQPYSDCYPVILDGAMVGWVEKNVAPSVIESLRRFKVLREKKVPPWTEIVLVPQTG
KASLYPGLYLFTTPCRMVRPVRNLGLGQQELIGTFEQVYLNVGIFEEELEEGVTTHQELF
PHSMLSVVAEFIPYSDHNQSPRNMYQCQMSKQTMGFPLHSYQDRSDNKLYRLQTPQSPLV
RPSMYDHYNMDNYPIGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSVYKTDVIDLA
EKFKGQDDIVFGVKPGDPKVKDKLDADGLPFIGSVLKYGDPYYSYINSITGQSHVVFFKY
QESCIVDNIKVCSNDTGTGRFKRVCITARIPRNPTIGDKFASRHGQKGILSRLWPAEDMP
FTESGMSPDILFNPHGFPSRMTIGMLIESMAGKSASLHGLSHDATPFRFSEKKSALEHFG
EMLKAAGYNFYGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTN
QPVGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCIDCGSLLSPLLEK
PPPHWSATRHRKTICLLCKKSDSIETVAVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggatctctccaagtggtgtaatctaaagcccgaaccgagtttaaagcacttgacagag
gcagggttcggtgtcccgaaaaacaaacagcacgtgcccgtgcaggagctggtgaaggcg
cacattgattcttttgatcaggcagttactgatggattatgtcgggttgtggagggcatt
cctccgttggagttcatgtacaggggagacagagtcagtctgtcttttgtcgaggccatc
attcacccgccagcgattgctaaaggaggaatcagcagagatgtgcgggtgttccctgcc
gagtgcagaggcaggcgctgcacatacaaggggaagctagtggcggatgtgagctggtct
attaatggcattcccaaaggaatcatcaaacaggctctgggacagctgccgatcatggtc
aaatcgaaactatgcaaccttcatggtctctcacccaaagaactcatccagcatcatgaa
gaagctgaggaaatgggtggttattttctggtgaatggcatagagaaggtgattcgtctt
ctgatcatgccaaggaggaactatcccatcaccatatcaagaccaaagtttaagaccaga
ggaccgggctacactcaatatggtgtttcaatgcactctgtaagggatgaacacacagcc
gttaatatgaatcttcactacctggaaaatggaacagtgatggtgaattttatataccag
aaagagctgttctttcttcccttgggctttgcactgaaggctctagtggattactcggac
taccaaatctaccaggagctgattaaaggtcgagaggagaactctttctttaagagctgt
gtctcagaaattctgcgtattgtcatggaccagggctgcaccactaaagccaaggtgctc
cgtttcttgggcgagcgtttccgggtcaaactcaacctcccagagtggtacactcacgag
caatgtgctcacttcctcttagatgaatgtctgtgtattcacctgaagtcagatgtggag
aagttctacatgttgtgtatgatgacacggaaactcttcagctttgccaagcaggagtgt
atggaggagaaccctgacagtctgatgttccatgaagttctcacaccaggccagatttac
ctcatgttcctgaaagagagaatggcaggctggctggtgtcggtgaaatatgccatggac
aagagaagtgaaaaactgggagcgttgaccggagatactataaccaaaatcttcaacaag
gctacagatctcactaaagccttcgagtatatgttagccacaggaaacctccagtccaag
acaggtctgggcttgttgcagaacaccggactgtgtgtcgtggcggataagctgaacttc
atccgttacctgtctcatttccggtgcgtgcacagaggagccagcttcgctaagatgagg
accacatctgtgcgtaagctgttgccagagtcttggggtttcctgtgtccggtacacact
cctgacggagaaccgtgcggccttatgaaccacatgactgcccatagtgagattgtgaca
caggtgcatcccacaaccaccctgcctgccctgctgtgctctctgggtgtgactgctgta
gacggtacccccggtcagccatattcagactgttatcctgtcatactggacggggccatg
gttggctgggtggaaaaaaatgtggcgccctcagtcatcgaatctctccgcagatttaag
gtgctgagagagaagaaagtgccgccctggactgagattgttctggttcctcagacgggt
aaagccagcttgtacccaggcctttatctgttcaccacaccctgtcgcatggtgcggccc
gtccggaaccttggcctgggccaacaggagcttattggcacctttgaacaggtgtacctg
aatgtgggcatcttcgaggaagagttagaggagggagtgaccacacatcaagagctgttt
cctcacagcatgttgagcgtagtggcagaattcattccttactctgatcacaaccagagc
cccagaaacatgtaccagtgccagatgagtaaacagaccatgggcttcccgctgcattcg
taccaggaccgatccgacaataaactgtaccgtctgcagaccccccagagtcctctggtc
agaccctcgatgtacgaccactataacatggacaattaccctattggcaccaacgcaata
gttgctgtcatttcttacactggctacgatatggaagatgctatgatcgtcaataagtcc
tcatgggagcgtggctttgctcatggttctgtttataagaccgacgtcatagatctggct
gaaaagttcaaaggtcaagatgacattgtgtttggggtgaagccaggtgaccccaaagta
aaggacaaactggatgcagatggattgccatttatcggctccgtgctgaagtatggagac
ccttactacagctacatcaattccattaccggccagagtcatgtggtctttttcaagtac
caggagagctgcattgtggacaatatcaaggtgtgcagcaatgacaccggcactggccgt
ttcaagcgtgtttgcatcacagcccgcattcccaggaaccccaccatcggagacaagttt
gccagcagacacggtcagaaaggaatcctgagccgcctgtggcccgcggaggacatgccc
ttcaccgagagtggtatgagcccggacatcctgttcaaccctcatggcttcccctctaga
atgaccatcggaatgcttatcgagagcatggctggaaaatctgcatccctccatggcctg
tctcacgacgccacacccttcaggttctctgagaaaaaatctgcattggagcacttcggt
gaaatgctgaaagcagcaggatacaacttctatggaacggaacggctctactctggcatc
agtggcttggagcttgaggcagacatcttcatcggggtggtttactaccagcgcttgcgt
catatggtctccgacaagttccaggtgagaactaccggagcgagagataaagtgaccaat
cagccagtgggagggaggaacatccagggaggaatccggttcggagagatggaacgggat
gctttgctggctcacgggtcgtcgtttctgcttcacgaccggctgtttaactgctcggac
cgctccgtggcgcaagtttgcatagactgtggcagcctgctgtcgccgcttctggaaaag
ccgccgcctcattggtcagctacacgccatcggaaaaccatctgcttgttgtgcaagaag
agcgactcaattgagactgtagccgttccttatgtgttcagatactttgtagcagagctt
gcagcaatgaacattaaagtcaaattagatgtcaagtaa
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