Massilia antarctica: IV454_11550
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Entry
IV454_11550 CDS
T08186
Symbol
mnmC
Name
(GenBank) FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
manc
Massilia antarctica
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
manc03016
]
IV454_11550 (mnmC)
Enzymes [BR:
manc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
IV454_11550 (mnmC)
Transfer RNA biogenesis [BR:
manc03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
IV454_11550 (mnmC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_8
FAD_binding_3
Pyr_redox_2
NAD_binding_9
FAD_binding_2
HI0933_like
GIDA
Pyr_redox
TrkA_N
3HCDH_N
AlaDh_PNT_C
Shikimate_DH
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
QPI52071
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Position
2547876..2549555
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AA seq
559 aa
AA seq
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MARSASAKSGADAVNWQPAWGGRTHFVIFDAAYGDGAAFQQTLHAWRNDPRRPARLHYIA
LANEALPGFRRIPQVEDAVTLDLLTAPLDSALEQLSARLDAIWLRGAADAGTRFAHALGK
LAEPGALLDADGLPHAQMATLARAGFAWEPGVQRAVFASRRPQAAPAPPRARHAIVIGAG
LAGAAACERLCARGWKVTLIERHAQPAREASGNLAGITMPLLSKDDNLMTRLSRAAFLYA
QAYWDRIGGNDIDSARCGVLQLARDPAHADVQRAIAASRAWPADFAEWLEAPAAGELLGA
PAPDGAWLFRQGGWVRPASACGAMLTACGDALVRRFGAGKVTLEQRGAGWCAIDVAGEVL
AQAPVVVLANGTGAADMPLAAGLPLSPVRGQVTHLAQGAAPALPFVLCREAYLTPAVGGW
HSLGASYDDDADPALRQDSQDENLAKIGAMLGDLALGRAAPLQGRVGFRCVAPDRMPLAG
ALPDPDAASRIERLRDVPRHAGVYGLLGYASRGLTWAPLAAELLAAQLNGEPLPLEADLV
AALDPARFLLRERRRGEVG
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcagtgcttccgcaaagagcggcgctgatgccgtgaactggcaacctgcctgg
ggcggacgcacccatttcgtcatattcgacgccgcctacggcgacggcgcggcctttcaa
cagaccttgcacgcctggcgcaacgacccgcggcggcccgcgcgcctgcattacattgcg
ctggccaacgaagcgctgccgggctttcggcgcatcccgcaagtggaagacgcggtcacg
ctcgacctgctcaccgcgccgctcgacagcgcgctcgaacaactgagcgcgcggctcgat
gccatctggctgcgcggcgccgctgacgccggcacccgctttgcccacgcgctgggcaag
ctggccgaacccggcgcgctgctcgacgccgacggcctcccgcacgcgcagatggcgacc
ctggcgcgcgccggctttgcctgggagcccggggtgcagcgcgccgttttcgccagccgc
cgtccgcaggccgcgccggcgccgccgcgcgcgcgccacgccatcgtgatcggtgccggc
ctggccggcgccgccgcctgcgaacgcttgtgcgcgcgcggctggaaggtcaccctgatc
gaacgccacgcgcagcccgcgcgcgaagcgtccggcaacctggccggcatcaccatgccg
ctgctctcgaaagacgacaacctcatgacgcgcctgtcgcgcgccgccttcctgtatgcg
caagcctactgggaccgcatcggcggcaacgacatcgacagcgcccgttgcggcgtgctg
caactggcgcgcgatccggcccatgccgacgtccagcgcgccatcgcggccagccgcgcc
tggcccgccgatttcgccgaatggctggaagcgccggcggcgggcgagttgcttggcgcc
cccgcgccggacggcgcctggctgttccgccaaggtggctgggtacgccccgccagcgcc
tgcggggccatgctcaccgcctgcggcgatgcgctggtgcgccgcttcggtgccggcaag
gtgacattggagcagcgcggcgccggctggtgcgccatcgacgtggccggcgaagtgctg
gcgcaagcgccggtggtggtgctggccaacggcaccggcgcggccgacatgccgctcgcc
gccggcctgcccttgtctcccgtgcgcggccaggtcacccatctggcgcagggggcggcg
ccggcgctgcccttcgtgctgtgccgcgaagcgtatctgacgccggccgtgggcggctgg
cacagcctgggcgccagctacgacgacgatgccgatccggccctgcgccaggacagccag
gacgagaacctggccaagatcggcgccatgctgggcgaccttgccctcgggcgcgctgcg
ccgctgcagggacgggtcggctttcgctgcgttgcgccggaccgcatgccgctggcgggc
gccttgcccgaccccgacgcggcgagccgcatcgagcgcctgcgcgacgtgccgcgccac
gccggtgtgtacggcttgctgggctatgcctcgcgcggcctgacctgggcgccgctggcg
gccgaactgctggccgcgcagttgaacggcgagccgctgccgctggaggccgacctggtc
gcggccctcgatccggcccgttttctgttgcgcgaacggcgccgtggcgaggtaggatag
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