Massilia antarctica: IV454_22220
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Entry
IV454_22220 CDS
T08186
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
manc
Massilia antarctica
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
manc03009
]
IV454_22220 (rimO)
Enzymes [BR:
manc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
IV454_22220 (rimO)
Ribosome biogenesis [BR:
manc03009
]
Prokaryotic type
ribosomal protein modification factors
IV454_22220 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
TRAM_2
Radical_SAM
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QPI48242
LinkDB
All DBs
Position
4999480..5000859
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AA seq
459 aa
AA seq
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MSELRRIPLPGAAPKVGFVSLGCPKALVDSEQILTQLRAEGYETAKSYEGADLVIVNTCG
FIDAAVQESLDAIGEALAENGRVIVTGCLGAKKDAAGDDIIMKVHPKVLAVTGPHALGEV
MDSVHLHLPKPHEPFFDLVPAQGIKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSRP
IADLMLEAENLFKAGVKELLVISQDTSAYGVDVKFRSGFWNGRPVKTHMTQLVEALGQLA
AQFGAWVRLHYVYPYPHVDQIIPMMSGGSVLPYLDIPMQHAHPDVLKRMKRPASGEKNLD
RIQTWRAMNPDLTIRSTFIAGFPGETEAEFEYLLDFLKEAQIDRLGCFAYSPVEGATANL
LDNPVPEEVREERRGRVMLLQEEISAKRLQAKVGKTMRVLVDEVGGKEAIGRSWADAPEI
DGVVHIKRSLVPGKKLTVGEFAEVTITAADAHDLWASVV
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacttcgtcgtattccccttcctggtgccgctccaaaagtcggctttgtctcg
ctcggttgccctaaggcgctggtcgactccgaacagatcctgacccagctgcgcgccgaa
ggttacgaaaccgccaagtcgtacgaaggcgcggacctggtcatcgtcaacacctgcggc
ttcatcgatgccgccgtccaggaatcgctcgacgccatcggcgaagcgctggccgaaaac
ggccgcgttatcgtcaccggctgcctcggcgccaaaaaagatgctgccggcgacgacatc
atcatgaaagtgcacccgaaagtgctggccgtcaccggccctcacgctctcggcgaagtc
atggactcggtccacctgcacctgcccaagccgcatgaacccttcttcgacctggtgccg
gcgcaaggcatcaagttgaccccgaagcattacgcttacctcaagatttccgaaggctgc
aatcaccgttgcagtttttgcatcattccatcgatgcgcggcgacctcgtttcgcgcccg
atcgccgacctgatgctggaagccgaaaacctgttcaaggccggcgtcaaggaattgctg
gtcatctcgcaggacaccagcgcctacggcgtcgacgtcaagttccgctccggtttctgg
aacggccgtccggtcaagacccacatgacgcaactggtcgaagcgctgggccagctggcc
gcgcagttcggcgcctgggtgcgcctgcactatgtgtatccgtatccgcatgtcgaccag
atcatcccgatgatgagcggcggctcggtcctgccttacctcgacattccgatgcagcac
gcccatccggacgtactcaagcgcatgaagcgtccggccagcggcgagaaaaacctcgac
cgcatccagacctggcgcgccatgaatccggacctgacgatccgctcgaccttcatcgct
ggcttcccgggcgaaaccgaggccgaattcgaatacctgctggacttcctcaaggaagcc
cagatcgaccgcctcggttgcttcgcgtattcgccggtggaaggcgctaccgccaacttg
ctggacaatccggtgccggaagaagtgcgcgaagaacgccgtggccgcgtcatgctgctg
caggaagaaatctcggccaagcgcctgcaggccaaggtcggcaagaccatgcgcgtgctg
gtcgacgaagtcggcggcaaggaagccatcggccgctcgtgggccgatgcgcccgaaatc
gacggcgtggtgcacatcaagcgctcgctggtgccgggcaaaaagctgaccgtcggcgaa
ttcgccgaggttaccatcaccgccgccgacgcccacgatctctgggcctcggtggtctag
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