Marisediminicola antarctica: BHD05_05405
Help
Entry
BHD05_05405 CDS
T06401
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
mant
Marisediminicola antarctica
Pathway
mant00190
Oxidative phosphorylation
mant03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mant00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
BHD05_05405
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BHD05_05405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mant03019
]
BHD05_05405
Enzymes [BR:
mant01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
BHD05_05405
Messenger RNA biogenesis [BR:
mant03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BHD05_05405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
QHO69170
UniProt:
A0A7L5AFD3
LinkDB
All DBs
Position
complement(1140043..1142223)
Genome browser
AA seq
726 aa
AA seq
DB search
MDSDISPVVAAVGADFLDDEYDDEWTWSDNGALPPDRFLDRELSWLAFNTRVLELAEDPD
LPLLERANFLAIFAGNLDEFFMVRVAGLKRRIVTGLAVPTNVGRAPRDVLSDIAARAHEL
QTRHAAAFTDLVKPALDDAGIHIETWADLGPADRVRVEEIFSSQIFPVLMPLAVDPAHPF
PYISGLSLNLSVRIRNPKTDREEFARLKVPPVLARFVQLPDDGSGMLRFIPLEDLISNHL
SHLFPGMEILDHHEFRVTRNEDVQVEEDESENLIQTLERELLRRRFGPPIRLEITDDMDP
VTLDLLVRELGITDQEVYRLPAPLDLAGLFDITKIDRPQLKYRKHVPTTATQLMPTEPGA
SPDIFASIARQDILLHHPYESFATSVQAFLEQAASDPDVLAIKQTLYRTSGDSPIVEALI
NAAEAGKQVLALVEIKARFDESANINWARKLEKAGVHVVYGIVGLKTHCKLALVVRQEEG
RLRHYSHIGTGNYNPKTSRLYEDLGLLTADDVVGKDLTRLFNELSGYAIEKKFKRLLVAP
LHLRKGLIKAIRAETAAALAGSPSGIQIKLNSIVDEAVIDALYEASNAGVPVQMVIRGIC
TLKPGVPGLSENISVRSVLGRYLEHSRIFSFHNGGNPDVYIGSADMMHRNLDRRIEALVR
LTSPEHLRAVESLFSLAMSEDTAAWKLAGDGIWTRHHLAADGTPLRDMQNVMMRRISQRK
RPGVRR
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgacatctctcccgtggtcgccgccgtcggcgcggacttccttgacgacgag
tacgacgacgagtggacgtggtccgacaacggcgccctcccgcccgaccggttcctcgac
cgcgaactgagctggctcgcgttcaacacccgggttctcgagctcgccgaagaccccgac
ctgccgctcctcgagcgggccaacttccttgcgatcttcgccggcaacctcgacgagttc
ttcatggtgcgcgttgcgggtctcaaacgccggatcgtgaccggcctcgccgttccgaca
aacgtcggccgtgcgccgcgcgacgtgctcagcgacattgccgcgcgcgcccacgagctg
cagacccggcacgccgcggccttcaccgacctcgtgaagcccgcgctcgacgacgccggg
attcacatcgagacctgggccgacctcggccccgccgaccgggtgcgcgtcgaggagatc
ttctcgtcgcagatcttcccggtgctcatgcccctcgccgtcgaccccgcgcatccgttc
ccctacatctccggactctcgctgaacctgtcggtgcgtatccgcaaccccaagaccgac
cgcgaggagttcgcgcggctcaaggtgccgccggtgctcgcgcgcttcgtgcagctgccg
gatgacggaagcgggatgctgcgcttcatccccctcgaagacctcatctcgaaccacctc
agtcacctgtttcccggcatggagatcctcgaccaccacgagtttcgcgtcacgcgcaac
gaagacgtgcaggttgaggaggacgagtcggagaacctcatccagacgctggagcgcgag
ctgctgcggcgccgcttcggcccgccgatccggctcgagatcaccgacgacatggacccg
gtgaccctcgacctgctcgtccgggagctggggatcaccgaccaggaggtctaccggctg
ccggcgccgctcgacctcgctggcctgttcgacatcacgaagatcgaccgcccacagctg
aagtaccgcaagcacgttccgacaacggcgacgcagctcatgccgaccgagcccggcgcc
agtcccgacatcttcgcctcgatcgcccggcaggacatcctgctgcaccacccctacgag
tcgttcgcgacgagtgtgcaggcgttcctcgagcaggccgcatccgaccccgacgtgctc
gcgatcaagcagaccctctaccgcacgagcggcgacagcccgattgtcgaggcgctcatc
aacgccgccgaggccggcaagcaggtgctcgccctggtcgagatcaaggcgaggttcgac
gagtccgcgaacatcaactgggcccgcaagctcgagaaggccggggtgcatgtcgtctac
ggcatcgtcggcctcaagacccactgcaagctcgctctcgtggtgcgccaggaggagggc
cgcctgcggcactacagccacatcggcaccggcaactacaacccgaagacctcccgcctg
tacgaggacctcggcctgttgacggcggacgatgtcgtcggcaaggacctcacccggctg
ttcaacgagctctccggctacgcaatcgagaagaagttcaagcgcctcctcgtcgccccg
ctgcacctgcgcaagggactcatcaaggccatcagggcggagacggccgccgcgctggcc
ggctccccctctggcatccagatcaagctcaactccatcgtcgacgaagcggtgatcgac
gcgctgtacgaggcgagcaacgccggtgtgcccgttcagatggtcatccgcggaatctgc
acgctcaagcctggcgtaccggggctcagcgagaacatctcggtgcgctcggtcctcggg
cgctatctggagcattcccggatcttctccttccacaacggcggcaacccggacgtctac
atcggcagcgccgacatgatgcaccgcaatctcgaccgccggatcgaggcgctcgtgcgg
ctcacgagcccggaacacctgcgcgccgtcgagagcctcttctccctcgcgatgtcggag
gacacggccgcgtggaagctcgcgggcgacggcatctggaccaggcaccatctcgccgcc
gatggcactcctctgcgcgacatgcagaatgtcatgatgaggcggatttcccagcgcaaa
cgccccggggtgcgccgatga
DBGET
integrated database retrieval system
