Misgurnus anguillicaudatus (oriental weatherfish): 129415695
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Entry
129415695 CDS
T09481
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129415695 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
manu03021
]
129415695 (polr1b)
Enzymes [BR:
manu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129415695 (polr1b)
Transcription machinery [BR:
manu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
129415695 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF1186
Motif
Other DBs
NCBI-GeneID:
129415695
NCBI-ProteinID:
XP_055025762
LinkDB
All DBs
Position
14:3725614..3736539
Genome browser
AA seq
1132 aa
AA seq
DB search
MDLSKWCNLLSAPSLKHLTEAGFGVPKEKQHVPVQELVKAHIESFDQAVTDGLCRVVGAI
PPLEFMYREDRISLSFVEAVIHPPAVSKGGISRDLRVFPAECRGRRCTYRGKLVADVSWS
VNGVPKGIIKQSLGQVPIMVKSKLCNLHGLSPKELIEHHEEAEEMGGYFIVNGIEKVIRL
LIMPRRNYPIAMIRPKFKSRGQGYTQYGISMHCVRDEHTAINMNLHYLDNGTVMLNFIYR
KELFFLPLGFALKALVDFSDFQIYQELIKGREENSFYKSCVSEMLRVVMEEGCTTKDKVL
NYLGERFRVKLNLPDWFTHKQCANFLLDECLCIHLKSDVEKFYMLCLMTRKLFSFAKQEC
MEENPDSLMCQEVLTPGQLYLMFMKEKMAGWLVSVKLALDKRSKRLGVLTADSVTKVFNM
GTDLTKAFEYMLATGNLQSKTGLGMLQDTGLCVVADKLNFIRYLSHFRCVHRGAAFAKMR
TTSVRKLLPESWGFVCPVHTPDGEPCGLMNHLTAHCEIVAPVYPTSTLPALLCSLGVTTA
DGTPGQPYSDCYPVILDGAMIGWVEKEMAPSVVESLRRFKVLGEKKVPPWTEIVLVPQTG
KASMYPGLYLFTTPCRMVRPVRNLALGKQELIGTFEQVYLNVGIFEEELEKGVSTHQELF
PHSMLSVVADFIPFSDHNQSPRNMYQCQMSKQTMGFPLHSYQDRADSKLYRLQTPQSPLV
RPAMYDHYNMDNYPIGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSVYKTELIDLS
EKYKGEESIVFGVKPDDPKVMNRLDADGLPFIGSVLKYGDPFYSCINLNTGRSYVTFYKN
QEDCVVDNIKVCSNDSGTGRFKRVCISVRVPRNPTIGDKFASRHGQKGILSRLWPTEDMP
FTESGMTPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFKFSEEHSALEHFG
EMLKAAGYNYYGTERLYSGLSGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGSRDKVTN
QPLGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAQVCVDCGSMLSPLLEK
PPPHWSATRHRNTICLLCNKSDSIETVSVPYVFRYFVAELAAMNIKIKLDVK
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggatctctcgaaatggtgcaatttattgtcggctccgagtttaaagcatttgacagag
gcagggtttggtgtgcctaaagagaaacagcacgttccggtgcaagagctggtaaaagcg
cacattgagtcatttgatcaggcagttactgatggattgtgtcgagttgtgggggccatt
cctccactggagttcatgtacagggaagacaggatcagtctgtcgtttgtggaggctgtg
attcaccccccagcagtttctaaggggggaatcagcagagatctgcgggtctttcctgct
gagtgcagaggcagacgatgtacatacagaggaaagctggtggcggatgtgagttggtct
gtaaatggagttcctaagggaatcatcaagcagtctctgggtcaggtgcccatcatggtc
aaatccaaactttgcaaccttcacggtctctcgcccaaagaactcatcgagcatcacgag
gaagctgaggaaatgggcggttattttatcgtgaacggcatcgagaaagtgattcgtctg
ctgatcatgccgaggagaaactatcccatcgccatgataagaccgaaatttaagagcaga
ggacagggctacacgcagtatggtatttcaatgcattgtgtaagggacgaacacacagcc
attaatatgaatcttcactacctggataatggaacagtcatgctgaatttcatttaccgg
aaagagttgttttttcttcccttgggctttgcgctaaaggctctggtggacttctcagat
ttccagatctatcaggagctgattaaaggtcgagaggagaactctttctataagagctgt
gtttctgaaatgctgcgtgtagttatggaggaaggctgcacgactaaagacaaggtgctg
aattacctgggcgagcgttttcgggtcaaactgaacctccctgattggtttactcacaag
cagtgtgccaactttctattagacgaatgcttgtgtattcatctgaagtcagacgtggag
aagttttacatgttgtgtctaatgacacggaagctcttcagctttgccaagcaggagtgt
atggaggaaaatccggacagtttgatgtgtcaggaagtcctcacacctgggcagctctac
ctcatgttcatgaaagagaagatggcggggtggctggtctctgtgaaactggccctcgac
aagagaagtaagagactcggagtactgactgcagatagtgtgactaaggtcttcaacatg
ggtacagatctcaccaaagcctttgagtatatgttagcaaccggaaacctccagtcaaag
acgggtctgggcatgctccaggatacaggactgtgtgtcgtggcagacaagctgaatttc
atccggtatctgtctcatttccgctgcgtgcacagaggagccgctttcgccaaaatgaga
accacgtctgtgcgaaaacttctgccggagtcctggggtttcgtgtgccccgtacacacg
cccgacggagagccgtgcggtctcatgaatcacctgactgcccactgcgagatcgtagcc
ccagtgtatcccaccagcaccctgccggccctgctctgctctctgggtgtgactacagca
gacgggaccccgggtcagccgtactctgattgttatcctgttatactggatggagccatg
atcggctgggtggagaaagagatggcaccatctgttgtcgagtctctccgcaggtttaaa
gtgctgggagagaagaaggtgccaccatggactgagatcgttttagttcctcagacgggt
aaagccagcatgtatcccggcctctatctgtttacaacgccctgtcgcatggtacggccc
gtccgaaacctcgccctgggcaaacaggagctcattggcacctttgaacaggtgtacctc
aatgtgggaatctttgaggaggaactcgagaaaggagtaagcacacatcaagagttgttt
cctcacagtatgttaagcgtggtggcagatttcatcccgttctccgaccacaaccagagt
cccagaaacatgtaccagtgccagatgagtaaacagaccatgggcttcccgttgcactcg
taccaggaccgtgccgacagtaagctttatcgtctccagacccctcagagtccgttggtg
agacctgcgatgtatgaccactacaacatggacaattatccaatcggcaccaatgcaatc
gtggccgttatttcatacaccggctacgatatggaggatgctatgattgtaaataaatcc
tcgtgggagcgtggctttgctcacggttcggtttataagactgaactcatagatctgtct
gagaagtacaaaggtgaggaaagcattgtgtttggggtcaagccagatgatccaaaagtg
atgaatcgactggatgcagacggactgccgtttataggctcggtgctgaagtatggagac
cctttctatagctgcatcaatctcaataccggcaggagttatgtgaccttttacaagaac
caagaagattgtgtggtggacaatatcaaagtatgcagcaatgactctggaacaggccgc
tttaagcgtgtgtgcatctcagtccgcgttcccaggaaccccacgattggagacaagttt
gccagtagacacggccagaagggaatcctgagtcggctatggcctacggaggatatgccc
tttactgagagcggcatgacccccgatatcttgttcaaccctcacggatttccttccaga
atgaccatcggaatgctcatcgagagcatggccggaaaatcggcggccctgcacggcctg
tgccacgacgccacccccttcaaattctctgaggaacactctgcgctggagcacttcggc
gagatgctgaaggccgcggggtacaattactacggtacggagcggctgtactctggactg
agcggtttggagctcgaggcggacatattcatcggtgtagtttactatcaacgtctgcgg
cacatggtttctgacaagttccaggtgagaactacaggatccagagacaaagtcacaaat
cagccgctgggaggaaggaacgtgcagggaggaatccggttcggagaaatggaacgggat
gctttgctggcccacgggacgtcgttcctgctgcacgaccggctgtttaactgctcggat
cggtctgtggcacaggtttgcgtggactgcggcagcatgctgtccccactcctggaaaag
ccgccacctcattggtcggccacacggcatagaaacaccatctgtctgctgtgcaataaa
agcgactccatcgagactgtgtccgtaccgtatgtgttcagatattttgtagcggagctt
gcggcaatgaacattaaaatcaaattagatgtcaagtaa
DBGET
integrated database retrieval system
