Misgurnus anguillicaudatus (oriental weatherfish): 129430137
Help
Entry
129430137 CDS
T09481
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129430137 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129430137 (tprb)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129430137 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
ERM_helical
Motif
Other DBs
NCBI-GeneID:
129430137
NCBI-ProteinID:
XP_055043154
LinkDB
All DBs
Position
22:16507386..16534748
Genome browser
AA seq
2359 aa
AA seq
DB search
MAAVLQQILERSEVSKLQKPVLTKLEKYISDQQCEIDSLKAQQEQYRVDSEQQYFDIEKK
FGESQAQFVSQTQEHQILKEDYIKLENDLKLLQEKSKEQASSYAKLESQQNELSKAKDEL
EAEKRELVRTLERRSQEMEHQSEDLKRLNERLMEVSGEKMQFQLKLDESEASEVSIKYKE
KRMEQEKDLLQGQVTWLNTELKAKSEELLSLSRQKGSEILELQCNLNNKEDKIAQLQDQV
NSLKVSNENLQRQAEEMNSKLKEAKEHQASLEEKFSSEINANIKLSNLYKGAAADAEAKS
EELSKAVEELHKLLKEAGEAHKALEMKMVELEGCKDKEIAELKEKISSQEKELDNANALL
SDAKHRVPSSRLTEELVTTMSPTASAVAKIIKPGMKLTEIYTAYVEAQEQLQREKLENKR
LHKYLDDIVQEMEAKAPILKRQREEHERLQKSVSSLSAKLEQAVAEVHRLQKEADEANKG
SSVLTRENQRLEVQLADMAQQVRVLLIELEEARGNHVMRDEEDGCSADVSSTSEVISQHL
VTFRSIEELQQQNQRLLVALRDLSEAKEKDELEGDTMRRSEVEKYLEELQHELEQLKEKR
AQDLQKVDAVARQRDMFRMLLAQTTGVTFPQLGAVTEDLMLTSTPRRSPAITPTTSTPTG
LVATAIESTESVEAKAALKQLQEVFMSYKKEKNESEKSLAEQSDKLQVQVTELRSENTKI
STQLEFTSKRYEMLQDNVEGYRKEIASLNEKTQKQAATIQQNEQTIHTLTHDLRAASEKR
ALAESEAENLRKERDMLKMVEARLTQEKESIQAQQLGQSLLLTNLKSIQATLERSETEVR
QRMTAQIEKQEREITQLQKRLENEVEQKHLLARNQDMQLMDAKKQLEAQAAQHQRTREQL
GAAQLELDKLRLQMSSGESRLVSPTAHTGLQSGEGEVETLRAQLNQAGKWADELAERLKS
TTASMEQYKSMCLNLEESLDKEKQVTEQVRKSVENQVEAVQEQYKQLEQKLQEVDKENQS
LQEEKNKAVAAVEQELSTLRKSLSSLQADYQSALERASVAVAQEQQAISDGQEQARLAAE
AQDKYEREMLLHAADVEALQAAKAQTQQACLLKQQLEEKIQSTSAQLLEARISWEEQEKI
LKEEQCKLESRCEDLQKQNTLLHEQIQTLSGKMASQLQRATTESPLNISLTEEGKSQEQL
LEILRFVRREKEIAESRFEVAQGESLRHRLRVEHLERELKDLQENLNSEREKMQVTAKTL
AQHDELMKKTETMNVLMETNKMLREEREKLVQELEETQAKVRKLESDLSPMQESITELSE
KSGVLQSEKKLLEDDIKRWKARTQHLVSQQKDTDPEEYKRMHSEREVHVKRIQQLTEETS
RLKAEASRNSGSLTTLQSQVQNLRENLGKVMVERDNLRKDQEAKVLDIQEKVKTITQVKK
IGRRYKTQYEELKVEYDKLVAAAASAPMQDQEAQQASAQELQGLRESLSQSENRARELDG
QLENLNRVVGEREAESRSAQEQASRLQGELTRLRQELQEKSSQEERLKQQLGEKEERTKK
AIVVAKQRISQLTNIKNQLQLENEELKQQKEELDVRVSALKSQYEGRLSRQERELRDLRE
QQERHGEQRDETPEQGSSKTQEQQRTTEQRQISLKTTPVAERGSASTSEPPTANIKPTPL
AATPSKPPAIPGNKSTPRASIKPMITPAPVPTPTPTATVMPTTQVESQEAMQSSEGPLEH
VTVYGSASGSVRSTSPNVQPTLSQPLSNVQQQNQATAFIQPTQQQSQPLAEPSNQESTAA
VLMPVSQLERPLSTSTGLWGATASTSSGSAVTASPSNPLTKRPREEEQESMSADTQSQDE
PNETPICKRVRIYRVELEEEGLVEESTEAESVVPGESQDAPDAGLFQTTYTLEMMDEMPG
PSQSVPGDQLLPHPSESHRSPEGPEHNVIVIGSDTDSEEDREETDEEEEEPDYGEEDEEE
EDEDDDEDEDGGIGEEGEDSNEGSGSRDGDEAYEGDDTEGPDPTDPGTETEESLGATDST
QRLADSQSTSFEIDTFEAFGADPPVTSSAPRPPQSPRRPQHSLPTRLNVSVSSAQEFGQP
AQVQRLPARRQSVGRGLQPITGMSSSAQQLLFEDDDRMVPSTPTLLPPRSEGYAEAMHYQ
QVAGVTRFRFGSSDDVPQTSSSHSDLGQMPSQGLGMYESSVFLHEEESGGRSVPTMPLLQ
IASTEPTLVPIFTISSEVTEHASQSVPMVSTSTPGLSAPAGPSGVEDRDDIFLDAGDSSA
EASLEPVSQTEGEEAAQPSDEASLPSTSQEPSSSSADTSSSSKARTGSGRQWTGGRGTRS
FVKRRDGPGVMGVRGRFAR
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgttgcagcaaatattggagcggtctgaggtatcgaaactccaaaaacct
gtcctgactaaactggagaagtacatttcggatcagcaatgtgaaattgattctctgaag
gcacaacaggagcaatatcgagtggacagtgaacaacagtattttgacatcgagaaaaag
ttcggagagagccaagctcagtttgtgtcccaaactcaagagcaccagatactaaaagag
gactacatcaaactggagaatgatttgaagcttttacaagagaaaagtaaggaacaagcg
tcttcctacgctaaactcgaatctcaacagaatgaactgtccaaagccaaagatgagctt
gaggcagagaagagggagctcgtgcggaccttggaaagaagatctcaggagatggaacac
caaagcgaggacctgaagcgtcttaatgaaagactgatggaggtcagtggagagaagatg
cagtttcagctcaaattggatgaatctgaagcatctgaagtttcgatcaagtataaagag
aaacgaatggagcaggaaaaagatctacttcaaggtcaagtcacctggctaaacactgag
ctcaaagccaagagtgaggagctgctgtctctctcacggcagaaaggcagtgagatcctg
gagctccaatgcaaccttaacaacaaggaggataagattgcccaacttcaagatcaggtg
aacagtctaaaggtgtccaatgagaaccttcagaggcaagccgaggaaatgaactccaaa
ctaaaagaggcaaaggagcaccaagccagtttggaagagaagttcagcagtgaaatcaat
gcaaatatcaaactttccaatttgtataagggagcagcggctgatgctgaggccaagagt
gaggagctcagcaaagctgtggaggaacttcacaagctgctcaaagaggctggagaagca
cataaagctctggagatgaagatggtggagctggagggttgtaaagacaaggaaattgct
gaactgaaagaaaaaatcagcagccaggagaaggaactggacaatgctaatgcattgctg
tctgatgccaaacacagagtaccctcttcacgtctcacagaagagctggtgaccaccatg
tcccccacagcatctgcagtagctaaaatcatcaaaccaggcatgaaactcacagagata
tatacagcatatgtagaggcccaagagcagctgcaacgagaaaagctcgagaacaaacgt
ctgcacaaatacctggatgacatcgttcaggagatggaagccaaggcgcccatcctcaag
aggcagagagaggaacatgagcgcttgcagaagtctgtctccagtctttctgctaaacta
gagcaagctgttgcggaggtccaccgcttgcaaaaggaggcagatgaagccaacaaaggt
tcttctgtgctgacaagagaaaaccaaaggcttgaagttcagcttgctgatatggctcaa
caggtccgtgtcctcctgattgaactggaggaggcacgtggtaatcatgtgatgcgtgat
gaggaagatggttgttcggctgatgtgagcagcacttccgaggtgatctctcagcatctg
gtcaccttccgcagcatcgaagagctccagcagcagaaccagcgtctcttggtggccctc
agagacctcagtgaggcaaaagagaaggatgagttggagggagacaccatgagacgcagt
gaggtggagaaatacctagaggagcttcagcacgagttggaacagttaaaggaaaagaga
gctcaagacttgcaaaaagttgatgcggttgcgcgacagagagacatgttccgcatgctg
cttgcccagaccactggcgtcaccttcccacagctaggtgctgtcaccgaggacctgatg
cttacttccaccccacgccgatctccagccatcacacccactacaagcacccctacagga
ctggttgccacggcaatagagtctacggagtccgtagaggccaaggctgccttgaaacag
ctgcaagaagtcttcatgtcttacaagaaggaaaaaaacgagtctgagaagtctctggct
gagcaaagtgataaacttcaggttcaagtgactgaattgcgctctgaaaacactaagatc
tctacgcagctcgagtttacgtccaaacggtacgaaatgctccaggataacgttgaggga
taccgtaaggagatcgcttctctaaatgagaagacccagaaacaggctgccacgatccag
cagaatgaacagaccatacacacgctcacccacgacctgcgagcagcatctgagaaacgt
gcacttgctgagtctgaagccgagaacttgcgtaaagagagagacatgttgaaaatggtg
gaggcacggctgacccaggagaaagagtctattcaggcccaacagcttggccagagtttg
ctgctgaccaacctcaaatcaatacaggcaactttggagcgctccgagactgaggtcagg
cagcgtatgactgctcagatcgagaagcaggagagagagatcactcagctgcagaagaga
ctggagaacgaagtagagcaaaaacacctgttggcacgcaatcaagatatgcagctgatg
gatgctaagaagcagctggaagcacaagcagctcagcaccagaggaccagagaacaactt
ggtgctgcccagctggagctcgacaaactgaggttgcagatgagtagcggtgagagtcgt
ctggtgtccccaacagcgcacacaggactgcaaagcggtgagggtgaagtggagactctg
cgtgcccagctgaatcaggcaggaaaatgggcggatgagctagccgagcgcctgaaaagc
accactgcaagtatggagcagtacaaatccatgtgtctgaacctggaggaatctctggat
aaagagaaacaggtgacagagcaggtgcgcaaatctgtggaaaaccaggtggaggcagtt
caggagcagtacaagcagctggagcagaaacttcaagaggtggacaaagaaaatcaaagc
ttgcaggaggagaaaaacaaagcagttgctgccgtagagcaggagctgagcacgctgaga
aagtctctgagcagcctccaggcagattaccagagtgccttagagagagcctccgttgct
gtagcccaggaacaacaggccatctcggatggtcaggagcaggccaggttggcggccgag
gcgcaggataagtacgagagggagatgttgctgcatgcagccgatgtggaggccctccag
gctgccaaagctcagactcagcaggcttgtcttctcaaacaacagcttgaggagaagatc
cagagcaccagtgcacagctgctggaggctcgcatctcttgggaggaacaggagaagatt
cttaaggaggagcagtgcaagttagagtctcgctgtgaggatctgcagaaacagaacacc
ctcctccatgagcagattcagactttgagtggaaagatggccagtcagctgcagcgtgcg
accactgagagtccactaaacatctcactgactgaggagggcaagtctcaggagcaactt
ctagagatcctcaggtttgtgcggcgagagaaggagatcgcagagtctcgctttgaggtt
gctcagggcgagagtctgaggcacaggcttagagtggagcatctggagagagagctaaag
gacctacaggagaacctgaattctgagagggagaagatgcaggtcactgcaaagacgctg
gcccagcatgatgagctcatgaagaagaccgagaccatgaatgtcctcatggaaaccaat
aagatgctgagagaggagagggaaaagctggtgcaagagctggaggagactcaagctaag
gtacgcaaactggagtcagacctctcacccatgcaagagtccatcacagagctgagcgag
aagagcggcgtcttacagtcagagaagaagcttctggaagacgacatcaaacgctggaaa
gcccgcactcagcatctggtaagccagcagaaagacactgacccagaggagtacaagcgc
atgcactccgagagggaggtgcatgtcaaacgtatccagcagctcactgaagagacaagc
cggctcaaggctgaggctagcaggaatagtggctctttgaccacactgcagtctcaggta
cagaacctgagggagaaccttgggaaggtgatggtggagagagacaatctaagaaaggac
caagaggccaaagttctggatatccaagaaaaagtcaaaaccatcacgcaggtcaagaag
attggccggcggtataaaactcagtatgaagagctcaaggtcgaatatgacaagctggtt
gctgcagcagcttctgcaccaatgcaggatcaagaggcccagcaggcatccgctcaagaa
cttcagggcctgagagagtccctcagccagtcagagaacagagcaagggaacttgatggt
cagctggagaaccttaatagagttgtgggtgagcgggaagcggagtcacgcagcgcacag
gaacaggcctctcgcctgcagggggaactgacacgcctcagacaggagcttcaagagaaa
tcttctcaagaggagcgactcaaacagcagctaggtgaaaaggaggagaggaccaagaag
gctatagttgtggcaaagcagaggatcagccagcttacaaacattaagaatcagctccag
ttggaaaatgaggagcttaagcaacaaaaagaagaactggatgtacgtgtgagcgcgcta
aagtcccagtacgagggacgtctgagcagacaggagagggagctgcgagacctccgcgag
cagcaggagagacatggagaacagagagatgagactccggagcagggctccagcaagacc
caggaacagcaacgaacaacagaacagcgacagatctctctgaagaccaccccagtggct
gaaagaggaagcgcaagcacttcagaacctccaaccgccaacataaagcccacaccactg
gcagcaacccccagcaagcctcctgccatcccagggaacaagtccaccccaagggccagc
atcaaacccatgatcacacctgccccagtgcccacccctacacccacggccacagtcatg
cccacgacacaggtggagagccaagaagccatgcagtcatccgagggcccgttggagcat
gtgaccgtgtacggcagtgctagcggttcagtgcgctcaaccagccctaacgttcagccc
acgctttctcaacctttgtcgaacgttcaacagcagaaccaagccactgctttcatccag
cccacccagcaacaatcccagcccctcgctgaaccatccaatcaagagtcgacggctgct
gttttgatgccggtctcacagttagagaggcctctttccacatccacgggactctggggt
gccactgctagcacaagcagtggtagtgcagtgacagcttctcctagtaatcccttgacc
aaacgtccccgtgaagaggagcaggagagtatgtctgctgacacacagtcccaggatgag
ccaaacgagaccccgatttgcaaaagggtccgcatctatagagtggagctggaggaagag
ggtttggttgaggagagcacagaggctgagagcgtggtaccaggggagagccaagatgcc
ccagatgctggactgtttcagaccacctatactttggagatgatggatgagatgccagga
ccatctcagtctgttcctggagatcagcttctgccgcatccctctgagagccatcgaagc
ccggaggggcctgagcataacgtcatagtcattggtagtgacacagactctgaggaagat
cgtgaagaaaccgacgaggaggaagaagagccggattatggagaggaggatgaggaagag
gaggatgaagatgacgacgaagacgaggatggtggcattggagaagagggagaggacagc
aatgaaggaagtggcagcagagatggcgatgaggcgtatgaaggcgacgacaccgagggt
ccagatcccacagatccaggcacagagacagaagaaagtctcggagctacagactccacc
caacgtttggcagattctcagagcaccagctttgaaatagacacatttgaggcctttgga
gctgacccacctgtcaccagctccgccccccgaccgccacaatcacccaggaggccgcag
cactctcttccaactcgactcaatgtctccgtctcatctgctcaagagtttggacaacct
gctcaagtccagcgtctcccagctcgacgtcagtcagtaggcagaggccttcagcctatt
accggaatgtctagtagtgcacagcaacttctcttcgaggatgatgacaggatggtgccc
agcacccctacgctacttcctcctcgttcagagggatatgctgaagcaatgcattatcaa
caggtcgcaggtgtaacgcggttccgctttggctcttcagatgacgtcccgcagaccagc
tcctcccattcagaccttggccaaatgccttcacaaggtttaggcatgtatgaaagttct
gtttttcttcatgaggaagaatcagggggccgcagtgtgcccacaatgccactactacag
attgccagtacagaaccaacacttgtgcctatttttaccatatcttctgaagtgaccgaa
catgcatctcagtctgtgcccatggtgagcacatccactccagggcttagcgctccggca
ggccctagtggagtggaggacagagatgatatctttctggatgcaggagacagcagtgct
gaagcttcacttgagcctgtgtctcagactgagggagaggaagctgcccagccttcagat
gaggccagcctaccctccactagccaggaaccttcttctagctctgcagacacaagcagc
tcttccaaagccagaacggggtccggcagacagtggactggtggtcgtggtacccggagt
ttcgtaaagaggagggatggaccaggtgtcatgggtgtgaggggacgttttgcccgctga
DBGET
integrated database retrieval system
