Misgurnus anguillicaudatus (oriental weatherfish): 129436253
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Entry
129436253 CDS
T09481
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03030
DNA replication
manu03410
Base excision repair
manu03420
Nucleotide excision repair
manu03430
Mismatch repair
manu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129436253 (pold1)
03410 Base excision repair
129436253 (pold1)
03420 Nucleotide excision repair
129436253 (pold1)
03430 Mismatch repair
129436253 (pold1)
03440 Homologous recombination
129436253 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
manu03032
]
129436253 (pold1)
03400 DNA repair and recombination proteins [BR:
manu03400
]
129436253 (pold1)
Enzymes [BR:
manu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
129436253 (pold1)
DNA replication proteins [BR:
manu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
129436253 (pold1)
DNA repair and recombination proteins [BR:
manu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
129436253 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
129436253 (pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_exo2
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
129436253
NCBI-ProteinID:
XP_055050239
LinkDB
All DBs
Position
2:34802942..34822076
Genome browser
AA seq
1105 aa
AA seq
DB search
MDFKRRNGGPALGGASQAKKGKVSTEWEDSPSQFEEELALFDEMEMEVESGEGEAGHDVI
PVGDLFSADLNPRWKRPPAPPLQPNSDTLIFQQIDLDYYLGSAVAGMPGQVQGKVPIVRM
FGVTDSGNSVCCHIHGFAPYFYVPAPNGFTNAHLADFKRELNSVVLKDMRSNKDNIAVTV
LAVDITRKESMYHYRGNQPHDFLRITMAMPRLIAPAKRLLEQGFKFGNFPTQSYQGFEAN
IDFEIRFMVDTDVVGCCWIELPKGQYRVREERSDGDSESRYPGKVSLCQYEVDVAWNDMI
SHPAEGEWQRIAPLRVLSFDIECAGRKGIFPEPEIDPVIQIASMVQRQGEKEPFIRTVFT
LQSCSSIVGSQILCFTQEKQLLQSWAEFVRTVDPDIITGYNIQNFDLPYLINRAATLKVH
FFPYLGRVRGIKSVLKDSNFQSKQMGRRENKTLNMEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVRTEGGEDYTGATVIEPEKGYYSV
PIATLDFSSLYPSIMMAHNLCYTTLLQKGQIEKLGLAPEDFIRTPTGDLFVKSSVRKGLL
PEILENLLGARKRAKAELKKETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEI
SQSVTGFGRQMIEQTKQLVESKYTIDNGYQADAKVIYGDTDSVMVKLGVATVQEAMNLGK
EAAEWVSSHFVPPIKLEFEKVYYPYLLINKKRYAGLYFSSSAEHHDKMDCKGIETVRRDN
CPLVANLINTCLQNILIDRDPDGAVGHAKEVISDLLCNRIDISQLVITKELTRTAQEYAG
KQAHVELAERMRKRDAGSAPNLGDRVPYVIIKAAKGVAAYMKSEDPIYVLENNIPIDTQY
YLEQQLSKPLLRIFEPILGESKAESVLLKGDHTRCKTVLTSRVGGLMAFAQKRSTCIGCR
AVLKTDVAVCDFCKKKESELYQKEIAHLSTLEEKFSRLWTQCQRCQGSLHEDVLCTSRDC
PIFYMRKKVQKDLDDQEKLVSRFGW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaacgccgcaatggaggccctgcattaggcggggcttcacaggccaaaaag
ggaaaagtgagcacggaatgggaggatagtccatcccagtttgaagaggaactcgctcta
tttgatgaaatggagatggaggttgaatcaggggagggggaggcaggtcatgatgtcatt
ccagtgggtgacttattctctgctgatcttaatccacgatggaaacgacctcctgcgcct
cctcttcagcctaattcagacacacttatatttcagcagattgatctggactactacctt
ggatcagctgttgcaggtatgccggggcaggttcaaggaaaagtacctatagtgcgcatg
tttggtgtgacagacagtgggaatagtgtgtgctgccatattcatggattcgccccatac
ttctatgttcctgcacccaacggttttacaaatgcgcatttggctgactttaagagagag
ctgaactctgttgtgctgaaggacatgcgttccaataaagacaacatagcagtcactgtg
ctggcagtggacatcaccaggaaagaaagtatgtatcattaccgtggaaaccaacctcat
gactttctgcggatcacaatggcgatgccgcgtctgattgccccagcaaagcgactcctg
gagcagggctttaaatttggcaatttccccactcaaagctaccagggctttgaagccaac
attgactttgagatcaggttcatggtggacactgatgtggttggttgttgttggattgag
cttcctaaaggacaatacagagtgagagaagagagaagtgatggcgattcagagtcaaga
tatccagggaaggtgtctctgtgtcagtatgaggtggatgtggcgtggaatgatatgatc
agtcatccggctgaaggagaatggcagaggatcgctcctctaagagtgctcagctttgat
atcgagtgcgctggcagaaagggcatttttcctgagccggagattgacccagtgattcaa
atcgcatctatggtgcagcgtcagggagagaaagagccgtttatcaggacagttttcacg
ttacagagctgttccagtatagtgggctcccagattctctgctttactcaggaaaagcag
cttttgcagagctgggcggagtttgtgaggacggtggatccggacatcatcactggttac
aatattcagaactttgaccttccataccttattaacagagctgcaactttaaaggtgcat
ttttttccgtacctgggtcgtgtgcggggcattaaatcagttttaaaagattccaatttc
cagagcaagcagatgggtcggcgtgagaacaaaacgctcaatatggagggacgtgtacag
tttgacctactgcaggtgttgttgagggattacaagctccgttcttacactctaaatgct
gtcagtttccattttctgcaagagcagaaggaggatgtgcagcattcaattattacagac
ctacagaatgggaatgagcaaacccgaaggcgtctggctgtatattgtctgaaggatgcg
tacttgccattgcgtttactgcagaagttaatgtgcgtcattaattatatggaaatggcc
agagttactggtgtgcccctgacatacctgctgtcccgtggacagcaaattaaagtggtt
tcacagctcctcagacaggctatgaagcaggatctggtgatgccagtggtgagaacagaa
ggtggagaggactacaccggagccacagtcatagagccagagaaaggatattacagcgtt
cctattgcgactctagatttctcttcgctgtatccctccattatgatggctcataatttg
tgttacactacacttctgcagaaaggccaaattgaaaaactgggtctggctccagaagac
tttatacggacccctacaggtgatctgtttgtgaagagctctgtcaggaaggggcttcta
cccgagatcctggaaaatttgctgggtgccaggaaaagggcgaaggcagagctaaagaaa
gagacggatcccttcaaaaagcaggtgctggatggaaggcagttggctttgaagataagt
gcaaactctgtgtatggttttactggagctcaggtgggaaaactgccctgcctggagatt
tcacagagtgtcactggctttggtaggcagatgattgaacaaaccaaacagcttgtggaa
tcgaaatacaccattgataatggttaccaggcggatgcaaaggtcatctacggagacaca
gactctgtaatggtgaagctgggtgtggccactgtacaagaagctatgaatctgggaaag
gaggcagctgaatgggtttcttcccatttcgttccaccgatcaaattggagtttgaaaag
gtatattacccttacctgctgatcaataagaagcggtacgcagggctgtatttctcttcc
agcgccgaacatcacgataagatggattgtaaaggaatagagacagtcagacgagataac
tgccctctagtggccaaccttataaacacatgcctccaaaacatcctcattgacagagac
cctgatggagcagtaggtcatgctaaagaggtgatctctgacctcctgtgcaaccgtatc
gacatcagtcagctggtcataactaaagagctcacacgcacagcgcaggaatacgctggc
aaacaggctcatgttgagctcgccgagagaatgcgaaagcgggatgctggaagcgctcca
aacctcggagaccgagttccttatgtcatcatcaaagcagctaaaggggtggcggcttat
atgaaatcagaggaccccatctatgtgctggagaacaacatccctatagacacacagtac
taccttgaacagcagctttccaaaccattacttcgcatctttgagccgatactgggtgaa
agtaaagctgagagtgtgttactgaagggagatcacacacgatgtaagacagtcttgacg
tccagggttggcggtctcatggctttcgctcagaagagaagcacttgcattggctgcaga
gctgtgcttaaaactgatgtggctgtgtgtgacttttgcaaaaagaaagagtctgagctt
tatcaaaaagagattgctcatctgtcgactttggaggaaaagttctcgcgtttgtggact
cagtgtcaacgctgtcaaggttcactacatgaagatgtgttgtgtaccagtcgagactgt
cccatcttttacatgaggaagaaggtacaaaaagatttggatgaccaggaaaagctggtc
tctcggttcggctggtga
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integrated database retrieval system
