Misgurnus anguillicaudatus (oriental weatherfish): 129436528
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Entry
129436528 CDS
T09481
Symbol
grin2ca
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04020
Calcium signaling pathway
manu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
129436528 (grin2ca)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129436528 (grin2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
manu04040
]
129436528 (grin2ca)
Ion channels [BR:
manu04040
]
Ligand-gated channels
Glutamate (ionotropic)
129436528 (grin2ca)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
129436528
NCBI-ProteinID:
XP_055050690
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All DBs
Position
2:40483543..40565115
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AA seq
1397 aa
AA seq
DB search
MGVHLGCLSDTLWLPLLLLLSVSSAPRCQGRPFGMVDSTVNVAVVFSGSTYQMEIKGRLS
RENFMDLPLEVNPITVLVNNTNPRTLLTRICDTLAANRVHGVVFEDNIGSEAVAQILDFI
STQTAVPILGISGGSAVVLPHKGDGSTFLQLGASIGQQISGMFKMMEEYNWDSFVVVTSL
YPGHDSYVDHIRAFIDTSYFLWEMQDVLTFDMSADGMNDLRARRLLQQIDAQVILAYCSY
DEAQYLFTLAREVGLVGPGYIWFIPSLAVGNPNLPPPDSFPVGLISIITDRWKMSLRNRV
RDGVAIVVKGVESFRKQRGFIPDGHMDCLSTVRPSTNETLYRYMLNVSWENTDFSFNNDG
YLVNPTMIIITLDRGRQWDKVGNYEFGILQTRYPVWPRYGSYLEPVSDNRHLTVATLEER
PFVIVEAVDPLTGTCLSNTVPCRRQSNKTETIVGHTEPYTKLCCKGFCIDILKKLSRNIK
FSYDLYLVTNGKHGKLVRGIWNGMIGEVFYRRADMAIGSLTINEERSEIIDFSVPFVETG
ISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYFSPVGYNRSLVSAK
DPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAF
MIQEQYIDTVSGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKYNQKG
VEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKESRWK
RPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAMGLSL
LVFAWEHLLYWKLRHSVRKSDRLDCLLAISRGIYSCFNGVEDTDRKGNMQNPDVTTSYTQ
ANMLKMLQTAKDIVSSARVENSLDNATKTIENWSRRDPEAARPTLPTCLIGTDFSHGRLP
FISSVTDNHSPYPQNVESTTQHLLEKPHTSTRPTSLRYTLPARTSHHHIYERTLPISSLS
SPHIAMRDPPPPTAPKPHVYVDPSCHPRYISYRDFQVPDIFVEHQETPVSHKPYMAGLGR
NKRSHSYVAASPETRRRDDYDVPQSCLAELKSDHLVENHSHTTPCMRSQYQRPISSCNAC
TKLYLEPDTDDIPLLGKDKVNRRASFLRATWGGDRIGQFDEKPSTSASSSSCVNMPDLFP
RVLVTNPKPPKTYGSVGNSRRYNVPAEPAYLDPAHMGSFPYKPQKLKYSKSIRLPSYREA
LLQNTASLRRSSSTLVHGHYSTYLNSYTDMPVYLGPLPQGPVHFHDHSKDMCHLFPCASH
CPDNAALVHRLGSRHTVYQSTGFGGYEGAGRSTEQSLHTLPVSSVCRDRRQVLVARNVHS
PFAPRPWRRVSSLESEV
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcatctagggtgtctcagcgacacactgtggctgccgttgctgctgctgttg
tccgtcagctccgccccccgttgccagggccgaccgttcgggatggttgactccaccgtg
aacgtggcggtggtcttcagtggctccacctaccagatggagatcaaagggcgactgagt
cgagagaacttcatggacctgccgctggaggtgaaccccattaccgtgctggtgaacaac
accaacccgcgcaccctactgacacgcatctgcgacacgctggctgctaacagggtgcac
ggagtggtctttgaagataacattgggtcggaggcggtggctcagatcctggacttcatc
tcgacgcagacggcggtgcccatattgggcatcagtggagggtccgctgttgtcttaccg
cacaagggtgacggctctacctttcttcagctgggtgcctctattgggcagcagatcagt
ggcatgtttaaaatgatggaggagtacaactgggacagttttgtggtggtgaccagtttg
tacccaggccacgacagctacgtggaccacatccgcgcctttatcgatacgtcctatttc
ctctgggagatgcaggacgtcttaacgttcgacatgtccgcggacggcatgaacgacctc
cgtgcccgaaggttacttcagcagatcgatgcccaggtgattctggcatactgctcctac
gacgaggcccaatacctgttcactctagccagggaagtgggtttggtcggtccagggtat
atctggtttattcccagcctggcagtgggaaaccccaatttacctccaccagacagtttt
cccgttggattgattagcattatcacagatcgctggaagatgagcttgaggaacagggtc
agggatggcgtagccattgtcgtaaaaggagtggagagcttccgcaagcaaagggggttt
attcccgacggacacatggattgtctgagtacagttcggccgtctaccaatgaaaccctc
tataggtacatgctgaacgtgtcctgggagaacacagacttttccttcaacaatgatgga
tatctggtcaatcctaccatgattataatcactctggaccggggcagacagtgggataag
gtgggaaattacgagtttggtatactgcaaacgagataccccgtctggccgcgttacggg
tcctacctggagcctgtgtcagataaccgtcacttaacagtagccacgttggaggaaagg
ccttttgtaatcgttgaagccgtggatccacttactggcacctgcctgagcaacactgtc
ccctgtagacgccaatcaaacaagacagaaacgattgttggacatactgagccctacacc
aaactttgctgcaaaggtttctgcatagacattttgaagaagctctcgcgtaacatcaaa
ttctcctatgacctctacctggtcaccaatggtaaacatggtaaactcgtacgtgggatc
tggaacggtatgatcggagaggtgttttataggagagcagacatggccatcggctctctc
actataaacgaggaacgatccgagatcattgacttctctgtgccattcgtggagactgga
attagtgtgatggtggccagaagcaatgggaccgtttctccatctgcgttcctggagcca
tacagtccggccgtgtgggtgatgatgttcgtcatgtgtcttactgtagtcgccattact
gtgtttgtattcgaatacttcagccctgtgggctacaaccgcagcctggttagtgccaaa
gatccaggtgggccgacattcaccattggaaagtcagtctggctgctttgggggatcgtc
tttaacaactctgtgcccattgaaaaccccaaaggcaccaccagcaagatcatggtgctg
gtgtgggccttctttgccgtgatcttcctagccagctacacagctaacctggctgccttc
atgatccaggaacagtacatcgacaccgtgtccgggctgagtgacaaaaaatttcagaga
ccgcaagaccagtatcctccattccggttcggtacggtgcccaacggcagcacggaacga
aacattcgcagcaattatccagagatgcattcccacatggtgaagtacaaccagaaaggt
gtggaagatgccctcaacagcctcaaaacagggaagctggatgcatttatatatgatgca
gctgtgctgaactacatggctggtaaagatgaaggctgtaaacttgtgactatcggcagt
gggaaagtattcgctactacaggttatggtatcgcccttcagaaagagtctcgctggaag
cgacccattgatctggctcttcttcagttcctcgctgatggtgacactcagaagcttcag
accgtgtggttgaccggcatctgtcgtaatgagaagaaagaggtgatgagctctaaactg
gacatagacaacatggccggggtgttttacatgcttctcgtagccatgggtctcagtctg
ctggtgtttgcctgggaacatctactgtactggaaactacgacattctgtccgcaagtct
gaccgcttggactgcctactagccatcagcaggggaatctacagctgctttaatggtgta
gaggacacggaccgtaaagggaacatgcagaacccagatgtcaccaccagctacactcag
gccaacatgctgaaaatgctccagacagctaaagacatcgtctcatctgccagagtggaa
aactctttggacaacgccaccaagaccatcgagaactggagtcgacgtgatccagaggcg
gcgagacctactcttcccacctgcctcataggaactgatttcagccacggtcgcctaccc
ttcatttccagtgtcacagacaatcattcaccttacccacaaaatgtggagagcaccacc
cagcatctgctggagaagcctcacacgagcacacgtcctacctcactgcgctacaccctt
cccgcacgaactagccatcaccacatctatgaacgaacgctacccatatccagcctcagc
agtccacatattgccatgagagacccaccgcctcctacagctcccaaaccccatgtgtac
gtggatccatcctgtcaccctcgctacatctcttaccgtgactttcaggtacctgacatc
ttcgtagagcaccaggaaactcccgtaagccataaaccgtacatggcaggtcttggtcga
aataaaaggtcccacagctacgttgcagcatctcctgagactcgacgtagggacgactac
gacgttccccagtcttgcctggccgagcttaaaagtgaccatctcgtggaaaaccattcc
cataccacaccatgcatgagaagccaataccagagacccatttcaagctgcaacgcctgc
acaaagctgtatctagaaccggacacggacgacattcctcttctggggaaggataaagtc
aaccgccgcgcctcttttctcagggccacgtggggcggcgatcggatcggacagtttgac
gagaagcccagcacttcggcatcctctagcagttgcgtcaacatgccggaccttttccca
agagttttagttacgaatcccaaacccccaaagacgtacgggagtgtcggtaacagtcgt
cgttacaacgtgccggctgaacctgcctatctggacccggcccatatgggctcttttcct
tacaagccccaaaagctcaaatactcaaagtccatccgtcttccgtcataccgggaggca
cttctacaaaacacagcgtccctgcgtcgttcctcttccacgctggtgcacggacactat
tcgacgtacctgaactcgtacacggacatgcctgtgtacctgggccctctaccacagggg
cctgtccatttccacgaccactccaaagacatgtgccacctgttcccctgcgccagccat
tgcccggataatgctgctctggttcaccggttaggcagcagacacacggtgtaccagagc
acaggtttcggaggctacgagggggccgggcgctcaaccgagcagtcgctacacactttg
ccggtgtcttctgtgtgtagggaccgcaggcaggttttagttgcgcggaatgtacacagt
cccttcgctccaaggccctggaggagggtgtccagtctggagtcagaggtgtga
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