Misgurnus anguillicaudatus (oriental weatherfish): 129453565
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Entry
129453565 CDS
T09481
Symbol
vcam1b
Name
(RefSeq) vascular cell adhesion protein 1b isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129453565 (vcam1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
manu04090
]
129453565 (vcam1b)
04091 Lectins [BR:
manu04091
]
129453565 (vcam1b)
CD molecules [BR:
manu04090
]
Proteins
129453565 (vcam1b)
Lectins [BR:
manu04091
]
I-type lectins (Siglecs)
129453565 (vcam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
ICAM1_3_5_D2
ICAM_N
C2-set_2
Motif
Other DBs
NCBI-GeneID:
129453565
NCBI-ProteinID:
XP_055073841
LinkDB
All DBs
Position
11:7689015..7711804
Genome browser
AA seq
1171 aa
AA seq
DB search
MDLTFLVFILLPIAAVSYKVNMPSEVLFKVGDRRTLTCSLPSCPERVTFSWTALEDKPLY
ANMESKHTHSLLIFENVTNNHENTVVCKATCGKDSKQRKTAIRVYSFQRNPVITGNEHMI
LGEESVLTCEVSHVHPSDYLEVELLYEDKVLVRKEGGDGTDSLKISHTFQPSREDDGKEI
TCRASLNVKGIPPDERTKETSGHLRVLSAPHNLRISGLTAVSLGSSLTLTCEAEASPKLE
FTWTSLKPDGQSVEIGKQREISIRNVTLSDAGVYQCEVSNNLGRQIINVSVVVQAPPMNT
IIEASQKTVLMEGDSVSIFCKSDGVPVDRVVLRQMLDSRTTELKSSVGSETSFTFESVKV
SDSGFYECTAFNTFGSQSASLSLTVEAAPHNLRISGLTAVSLGSSLTLTCEAEGSPELEF
TWTSLKPDGQSVEIGKQREISIRNVTLSDAGVYQCEVSNNFGRQTDNVSVVVQAPPMNTI
IEVSQKTVLMEGDSVSIFCKSDGVPVDRVVMRRMLDSRTTELKSSVGSETSFTFESVKVS
DSGFYECTAFNTFGSQSASLSLTVEAAPHNLRISGLTAVSLGSSLTLTCEAEASPELEFT
WTSLKPDGQSVEIGKQREISIRNVTLSDAGVYQCEVSNNFGRQTDNVSVVVQAPPMNTII
EASQQTVLKEGQSISISCKSDGVPVDRVVLRRMLDSRATELKRSVGSETSFTFESVKLSD
SGFYECTAFNQFGSQSASLSLTVEAYLLEVELQPSDAIIAESGSSFTLSCNASGCPQPMF
SWKSLGNLPNRGLIKTDGLLSKLFLNPVKVEDEGTYTCEVTCGSAAKSKQTKVNVFSFPT
SPVVESPGPSLEGEMIQLTCTVLDVFPANFFRIVWTDGERELHSESGMFSSHLQNLTSVL
SYRVEAKDQDKLMTCKVSLDMNGVPAAQTVKTASTALSVHYPPRGTRITVIPQGELKEGE
SVSISCLSDSVPVGRVELIRVVDGIETELMARDGVETSVILTPLELDDSGLYVCKASNRH
GSESDSVEIKVKAPPRNTTVEVFPSFEVQEGQNITICCNSVSFPPPAVVLRKLDSESVIY
SLDGVFQLINLTAKDTGLYQVNVTNDLGYETEIFTIHVMEKRFKSPPSWTDFITPAICLG
ATAALVGIMVYLWRDRKKGSYDLTKCNPDTV
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggatttaacttttcttgtatttatcttactaccaatcgcagctgtttcatataaggtg
aatatgccctccgaagtcctgtttaaggtgggtgacaggaggacgttgacgtgcagcctg
ccctcatgcccggagcgagtgacgttttcttggactgcgttagaggacaaaccgctatac
gccaacatggagagcaagcacacacattccttgttgatctttgaaaatgtcacgaataat
cacgaaaacaccgtagtgtgcaaagcaacctgtgggaaggactcaaaacagaggaaaact
gcgattagagtttattcttttcaaagaaacccagttataaccgggaacgagcacatgata
ctcggcgaggagagcgtcttgacctgtgaggtatctcatgtacacccgtcagattacctt
gaagtcgaattgctatatgaagacaaagttctggtcaggaaagaagggggagatggtacc
gatagtttgaagatatcccacacattccaaccttcaagggaagacgacggaaaggaaata
acctgcagagcatcacttaatgttaaaggcataccacctgatgagaggaccaaagagaca
tctggacacctgagggttctttctgcacctcataatcttcgaatatctggattaaccgca
gtctcactgggatccagtttaactttgacctgtgaggcagaggccagccctaagctcgag
tttacatggacgtcacttaaaccagatggccagtctgtcgaaataggaaaacaacgagag
atctccatacgcaatgtgaccctatctgatgccggtgtttaccagtgtgaagttagcaat
aatttgggaagacaaattatcaacgtttctgttgtcgttcaagcacctccaatgaatacg
atcattgaagcaagtcaaaaaacagttctgatggagggagactccgtaagcatcttctgc
aaatccgatggggtcccagtggatcgtgtggtgctgagacaaatgctggatagcagaaca
acagagctgaagagcagcgttgggtctgaaacatcatttacctttgaatctgtcaaggtg
tccgactctggcttttatgaatgtacggccttcaatacgtttggaagtcagagtgcttct
cttagccttacagttgaagctgcacctcataatctccgaatatctggattaaccgcagtc
tcactgggatccagtttaactttgacctgtgaggcagagggcagccctgagcttgagttt
acatggacgtcacttaaaccagatggccagtctgtcgaaataggaaaacaacgagagatc
tccatacgcaatgtgaccctatctgatgctggtgtttaccagtgtgaagttagcaataat
tttggaagacaaacggacaatgtttctgttgtcgttcaagcacctccaatgaatacgatc
attgaagtaagtcaaaaaacagttctgatggagggagactccgtaagcatcttctgcaaa
tccgatggggtcccagtggatcgtgtggtgatgagacgaatgctggatagcagaacaaca
gagctgaagagcagcgttgggtctgaaacatcatttacctttgaatctgtcaaggtgtcc
gactctggcttttatgaatgtacggccttcaatacgtttggaagtcagagtgcttctctt
agccttacagttgaagctgcacctcataatctccgaatatctggattaaccgcagtctca
ctgggatccagtttaactttgacctgtgaggcagaggccagccctgagcttgagtttaca
tggacgtcacttaaaccagatggccagtctgtcgaaataggaaaacaacgagagatctcc
atacgcaatgtgaccctatctgatgctggtgtttaccagtgtgaagttagcaataatttt
ggaagacaaacggacaatgtttctgttgtcgttcaagcacccccaatgaatacgatcatt
gaagcaagtcaacaaacagttctgaaggaaggacagtccataagcatctcctgcaaatcc
gatggggtcccagtggatcgtgtggtgctgagacgaatgctggatagcagagcaaccgag
ctgaagagaagtgttgggtctgaaacatcatttacctttgaatctgtcaagctctccgac
tctggcttttatgaatgtacggccttcaatcagtttggaagtcagagtgcttctcttagc
cttacagttgaagcttatttgcttgaagtggaactccaaccaagtgatgcgatcatagca
gaaagcggctccagctttacgctttcctgcaatgcttcaggttgcccccaacccatgttc
tcctggaagagtcttggaaatctaccaaaccgaggccttattaaaaccgatggcttattg
tccaagctgttcctcaacccggtgaaggtggaagatgaaggaacttacacctgtgaggtc
acatgcggctcagctgcgaagtccaagcagaccaaagtgaatgtgttctcgtttcctaca
agtcctgtggtagaaagtcccggaccttctctggagggagagatgatacagttgacctgc
accgttctggatgttttcccagccaatttcttccgaattgtgtggacggatggggagcgg
gaacttcattctgaatctgggatgttttcgagtcatcttcagaatctgacttcggtgttg
tcttatcgcgtagaggctaaagaccaagacaaattaatgacctgcaaagtctcactggat
atgaatggtgtaccggcagctcaaactgtaaagacggcttcaacagcattgtccgttcac
tatcctcccagagggaccaggataactgtgatcccacagggcgagctcaaagaaggagaa
tctgtgagcatttcctgcctgtccgacagcgttccagtagggcgcgtggaactgatcagg
gttgtggatgggatagaaacagagctgatggccagggatggggttgaaacatcggttatc
ctcacgcctcttgagctggatgactccggcctatatgtgtgcaaagcgtctaaccggcat
ggaagtgaaagtgatagtgttgaaattaaagtgaaagcaccacccaggaacacaacggtg
gaggtcttcccatcctttgaggttcaggagggccaaaatatcaccatctgttgtaactcc
gtgagctttcctccacctgcggtggtcctcaggaagctggatagcgagtcagtcatctac
tctctcgatggcgtctttcagctgatcaaccttactgccaaagacacaggactgtaccag
gtcaatgtcaccaatgatttgggctacgaaactgagattttcactatacatgtgatggag
aaaagatttaagtctccaccaagctggactgattttataacccctgcaatctgcctggga
gccactgcagcacttgttggtattatggtgtatctctggagagaccgaaagaagggttcg
tacgatctcacgaagtgcaatccggacaccgtatag
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integrated database retrieval system
