Marinobacter nauticus VT8: Maqu_0541
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Entry
Maqu_0541 CDS
T00454
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
maq
Marinobacter nauticus VT8
Pathway
maq03030
DNA replication
maq03410
Base excision repair
maq03420
Nucleotide excision repair
maq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
maq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Maqu_0541
03410 Base excision repair
Maqu_0541
03420 Nucleotide excision repair
Maqu_0541
03440 Homologous recombination
Maqu_0541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maq03032
]
Maqu_0541
03400 DNA repair and recombination proteins [BR:
maq03400
]
Maqu_0541
Enzymes [BR:
maq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Maqu_0541
DNA replication proteins [BR:
maq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Maqu_0541
DNA repair and recombination proteins [BR:
maq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Maqu_0541
NER (nucleotide excision repair)
GGR (global genome repair) factors
Maqu_0541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Prok-E2_E
Motif
Other DBs
NCBI-ProteinID:
ABM17642
UniProt:
A1TY23
LinkDB
All DBs
Position
complement(613761..616487)
Genome browser
AA seq
908 aa
AA seq
DB search
MTEQTNPPVVLVDGSSYLFRAYHALPPLTTSKNHPTGAIKGVISMLRRIEQDFPGSKTVV
VFDAKGKTFRHDMYEEYKANRPPMPDDLAVQIEPIHEIVRAMGLPLLIVPGVEADDVIGT
LAHEATSKGIDVVVSTGDKDMAQLVSDHVTLINTMTETAMDRDGVVEKFGVTPEQIIDYL
ALVGDKVDNIPGVNKCGPKTAVKWLQSYDNLDNLIEHSDEIKGKIGEYLREATDTLPLSR
ELATIRTDVELEFGLEDLQERQQDDASLLELFKEYEFRTWIAELENGSSSDEGSQSSQPQ
PKPSVEKQYQVITEQADLDQWLKKLKDSDLFAFDTETTSLRYMDAEIVGVSFAVEPGKAA
YVPLGHDYMGAPEQLDRDSVLEQLKPLLEDPKHKKVGQNLKYDKNVLANHDIQLEGIAED
TMVESYVLNSVGTRHDMDSLARTYLDEETITYESIAGKGAKQLTFNQIDLESAGPYAAED
ADITLRLHQTLAPRLKDTGKLESVYREIDLPLVPVLSRMEQRGTLISASTLRQHSQELAE
RMAELEKEAHEVAGEAFNLGSTKQLQAILYDKLGLRVIKKTPKGAPSTAEPVLQELAHEH
ELPRLIVEHRSLSKLKSTYTDTLPELIHHRTGRVHTSYHQAVTATGRLSSSEPNLQNIPI
RTQEGRRIRQAFIAPKGYKLLAADYSQIELRIMAHLSGDRGLLTAFEHGEDIHKATAAEV
FGVTVDEVTGDQRRSAKAINFGLIYGMSAFGLSRQLEVDRKTAQEYIDRYFERYPGVLKY
MDNIRKQAHDDGYVETLYGRRLYLPEINARNKQLQQAAERTAINAPMQGTAADIIKRAMI
EVDNWLRSEHASDACMTMQVHDELIIEVREEAVDKVKDGLVKRMSAAASLDVPLLVEAGV
GDNWDQAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaaaccaaccctcccgtggttctggtggacggatcgtcttacctgttccgt
gcctaccatgccctgccgccactgactaccagcaagaatcacccgactggcgccatcaaa
ggcgtaatcagcatgttgcggcggattgaacaggactttccgggctcaaaaaccgtggtg
gtatttgatgccaagggtaagactttccggcacgacatgtatgaggaatacaaagccaat
cgcccccccatgccggatgatctggcggtacaaattgaacccattcacgagattgtcagg
gcgatgggcttaccactgttgatcgtgcccggcgtcgaggccgacgatgtcatcggcacc
ctggcccatgaagccaccagcaagggcatcgatgtggtcgtgtctaccggcgataaagac
atggctcaactggtcagcgaccacgttaccctcatcaacaccatgaccgaaaccgccatg
gaccgggacggggtcgttgaaaagtttggtgttaccccggagcagatcatcgattacctc
gccctggtgggtgacaaagtcgacaacattcccggtgtaaacaaatgcggcccgaaaacc
gccgtcaaatggctacagagctacgacaacctcgacaacctcattgagcattccgacgag
atcaaaggcaaaatcggcgaatacctgagggaagcaaccgacaccctgcccctgagccgg
gagctggccaccatccggaccgatgtggaactcgaattcgggctggaggatcttcaggaa
cgccagcaggacgacgccagtctgttggagctcttcaaagagtacgaattccgcacctgg
atcgcggaactggaaaacggctcctcatcagacgaaggctcccagagcagccaaccacag
ccgaaaccttcggtggaaaagcagtatcaggtcattaccgagcaggcggacctggaccag
tggctgaagaaactcaaagattccgatctgttcgccttcgacaccgaaaccaccagcctc
cgctacatggatgccgaaattgtcggcgtttcgtttgctgttgagccgggaaaggccgct
tacgtgccactgggccatgattatatgggcgcgccggagcaactggaccgcgactctgtg
ctggaacagctgaagccgttgcttgaagacccgaaacacaaaaaggtcgggcagaacctc
aagtacgacaaaaacgtgctggccaaccatgatatacagctggagggcatcgccgaggac
accatggtggagtcctacgtactgaattcggtcggcacccgccacgacatggacagcctg
gcccgaacctatcttgatgaagaaaccatcacctacgaatcgattgcgggcaaaggcgcc
aagcaactgacgttcaaccaaatcgatctggaaagcgcggggccctatgccgccgaagac
gctgacatcaccctgcgcctgcaccagactctcgccccgaggctgaaagacaccggcaag
ctggaatccgtctaccgggaaatcgacctgccgctggtgccggtgctgtcccggatggaa
cagcggggcaccctgatcagtgccagcacgctacgccagcacagccaggaacttgcagag
cgcatggctgaactggagaaggaagcccacgaggttgccggcgaagctttcaacctgggc
tccaccaaacaattgcaggccatcctttacgacaaacttggcctgcgggtcatcaagaag
acaccaaagggcgcgccatcgacggccgagccggttctgcaggagctggcccacgagcac
gaactgccccggctgattgtcgagcaccgcagcctgagcaagctgaagtccacttatact
gacaccctgcccgagcttatccaccaccgcaccgggcgagtgcacacttcctatcatcag
gcggtgacagcgacaggacgcttgtcttcatcggaacccaacctgcagaacattccgatt
cggacccaggaaggccgacgcatacgccaggcatttattgccccgaaaggctacaagttg
ctggccgctgactactcccagattgagcttcgcatcatggctcacctgtctggcgataga
ggtctactgaccgcgttcgaacacggcgaagacattcacaaggccaccgcagccgaagtc
ttcggcgtgacagtggatgaggtaaccggcgaccagcgtcggagtgccaaggcgatcaac
ttcgggctgatctacggcatgtcggcattcggactttcgcgccagctggaagtggaccga
aaaaccgcccaggaatacatcgaccggtatttcgagcgttaccccggcgtactcaaatac
atggacaacatccgcaaacaggcccatgacgacggctacgtggaaacgctctacggccgc
cgcctgtacctgccggagatcaacgcacgtaacaagcagctgcagcaggctgccgagcgc
accgccatcaatgcgcccatgcagggcacggccgccgatatcatcaagcgggccatgatc
gaggtagacaactggctgcgcagcgaacacgcgagcgatgcctgcatgaccatgcaggtc
cacgacgaactgatcatcgaagttcgcgaagaagccgtagacaaagtcaaagatggcctg
gtcaagcgcatgtccgccgccgccagcctggatgtgccactgctggtggaagccggtgtg
ggtgacaactgggaccaggctcactaa
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