KEGG   Palleronia sp. THAF1: FIU81_04895
Entry
FIU81_04895       CDS       T06247                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
maru  Palleronia sp. THAF1
Pathway
maru00740  Riboflavin metabolism
maru01100  Metabolic pathways
maru01110  Biosynthesis of secondary metabolites
maru01240  Biosynthesis of cofactors
maru02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:maru00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    FIU81_04895 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FIU81_04895 (ribD)
Enzymes [BR:maru01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     FIU81_04895 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     FIU81_04895 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: QFU08004
UniProt: A0A5P9JDN3
LinkDB
Position
942270..943343
AA seq 357 aa
MAHALALGRRGQGATWPNPAVGCVITRDGRVVGRGWTQPGGRPHAEVVAIAQAGSAARGA
TAYVSLEPCAHHGRTPPCAEALIAAGVVRVVTALEDPDPRVAGRGHAMLRAAGVEVVEGV
GSAEAGHDQIGFLTRVTRNRPMVTLKLATSLDGRIATASGESQWITGPDARRAVHGMRLT
HDAVLVGGGTARADDPRLTVRDFGPVRQPIRIIAARKLDLPMDGALWVSVPDAPLWLLHG
SEADPTRIAAWTEQGARCIPIPVIKGHLDPASMLATLGEEGMTRIFCEGGGSLAGSLMHA
DLVDRLVTFQAGVMLGAEGQPAIAALGIDALNQAQRFELHDTRRIGADIVSHWSRRP
NT seq 1074 nt   +upstreamnt  +downstreamnt
atggcccacgcgctggcactgggacggcgcggccagggcgcaacctggccaaaccctgct
gttggctgcgtgatcacccgcgatggtcgcgtcgttggccggggctggacccaacccgga
ggccgcccgcacgctgaagtcgttgccattgcacaggctggaagcgccgcaaggggggcg
accgcctacgtcagccttgaaccctgcgcccaccacggtcgaacgcctccttgcgccgaa
gcgctcatcgccgctggtgtcgtccgcgtggtcaccgcgcttgaagacccggacccccgc
gtcgccggtcgcggtcacgcgatgttgcgcgcggccggggtagaagtggtcgaaggcgtc
ggcagtgcagaggcgggtcatgaccaaattggtttcctgacgcgggttacacgaaaccgg
cccatggtgacgctgaaactggccacgtcgctcgacggacgcatcgccaccgccagcggc
gaaagccagtggatcaccgggccggacgcgcgtcgcgcggtgcatggcatgcggctgacc
catgacgccgtgctggtcggcggcggcaccgcgcgcgccgacgatccgcgcctgacggtg
cgcgacttcggcccggtgcgccaacccatccgcatcatcgcggcccgcaagctcgacttg
ccgatggatggtgcgctgtgggtctccgttcccgatgctcccttgtggctgttgcacggg
tcagaggccgacccaacccgcatcgcggcatggaccgaacaaggcgcacgctgcatcccg
atcccggtcatcaagggccacctcgaccctgcatccatgcttgcaaccctcggtgaagag
ggcatgacgcgaatcttctgcgaaggcggcggcagcctggccgggtcactcatgcacgca
gacctcgtggatcggctcgtcacatttcaggctggcgtgatgctcggggccgaaggccaa
cccgcgatcgccgcccttggcatcgacgcactgaaccaggcgcaacgcttcgagctacac
gacactcgacggatcggggcggacatcgtctcacactggtcgcgccgcccctga

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