Myxocyprinus asiaticus (Chinese sucker): 127411915
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Entry
127411915 CDS
T08782
Name
(RefSeq) DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
127411915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masi03400
]
127411915
DNA repair and recombination proteins [BR:
masi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
127411915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
127411915
NCBI-ProteinID:
XP_051503777
LinkDB
All DBs
Position
21:complement(4034557..4056053)
Genome browser
AA seq
1373 aa
AA seq
DB search
MAKQSSLFNFFTKSPPPAVKDKSNSSPVEADLPSAVRKSNTSPKEEAKVNSKKAASKPVK
SQAKTGHVKLFGGKAVTAKESSSSKYNAGTLVWAKMEGHPWWPCMVVPQPLSGQQMRGRG
RDQRLHVHFFDEPPTRGWVNTKYIREYQGSDSADAKSGGVFFSGNPVIRKAMELADISMK
DSLEQRLKMPVCMDPSDEEEEDEEDMEVEKSTVSDEEMSEEEFGEKVKPSQRTPRVAAGK
GQKSKRRRIVVASDSDDSGEEFKPDQAGGSSEDEDEEDGVSSGTEEEQESEPETEPDSPV
KPVKRKRTSEKPAKSKKLISSDTSKRAPAALPSLASNTKSRLSAFSAPDNFESQNNSTGG
TDGGSTVWDHEKLDWLKDGRRKDAQRKRQSDENYDPTTLYVPEDFLNRTTPGMRRWWQLK
SEMFDTVLFYKVGKFYELYHMDAVIGVNELGLTFMKGTWAHSGFPEIGFGRFSDVLVQKG
FKVARVEQTETPEMMEARCKAMARPTKFDRVVKREVCRIITRGTQTYSVLDGAPSETQSK
YLLSIKEKSEEDSAGHGHIYGVCFIDTSVGRFHVGQFQDDRHCSRLRTLVAHYSPAQVLF
ERGNPSAETHKIFKAILASALQEGLNAGSQFWDAQKTLKVLAEEDYFKESPGTGNDDGGS
VLPLTLKAMASESDSLSLTPEKGYELALSALGGCIFYLKKCLVDQELLSMGNFEEYVPVD
VEMEQAGGASCFFAQTRQRMVLDGVTLANLEILQNSSGGQEGTLLERLDTCCTPFGKRLL
KQWLCAPLCNPSSVGDRLDALEDLMGAPSQATEVTDLLKKLPDLERLLSKIHSMGTPLKG
QDHPDSRAVLYEEVVYSKRKIADFLSALEGFKVMKEVVSIMDPIAEAFQSKLLRQVVRLE
NEDGLFPDLSPELKRWDTAFDHQKARTTGVITPKAGFDPEYDQALNGIKDCERGLQEYLD
RQKKRLGCKNLAYWGTGKNRYQLEVPDSVSERSVPEEYEVRSTKKGWKRYSTKEIEQLFS
ELQSWEDKRDTAMKDCMRRLFYNFDKNYKDWQTAVECMAVLDVLLSMSRYSQSGDGPMTR
PEMVLPGDGSQSSPFLDLRGSRHPCVTKTFFGDDFIPNDIFIGCPGSEEDECQDNNKALA
PCVLVTGPNMGGKSTLMRQCGLVVILAQLGCYVPAESLRLTPVDRVFTRLGASDRIMSGE
STFFVELSETASILLHATNHSLVLLDELGRGTATYDGTAIASAVVKELSEKICCRTLFST
HYHSLVEDHAQDPAVRLGHMACMVENECEDPSQETITFLYKFIGGACPKSYGFNAARLAS
IPEEVIQSGHKKAREFERSTVSLRVFKKLCSFVEDPGAAREQFATLVRMIGNQ
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcaaagttccctctttaatttcttcacgaagtcgcctcctcccgctgtgaag
gacaaatccaactcatccccagttgaagcagatctgccctcagcagtgagaaagtccaac
acctcacctaaagaagaggcgaaagtcaacagcaagaaagctgcttcaaaacctgttaaa
tctcaggcaaaaactggacatgtaaaactgttcggagggaaagcggtcactgcaaaggag
agttcttcctctaagtataatgctggtactttggtatgggccaagatggaagggcatccc
tggtggccctgtatggttgttcctcaacctctgagcggacagcagatgaggggccgtggt
cgagaccagagacttcatgttcacttctttgatgagccaccaacacgaggctgggttaac
acaaagtacataagagagtatcaaggctctgatagtgcagatgccaaatcaggcggtgtg
ttcttcagcggtaatcctgtgatccgtaaggcaatggagctggcagatatttcgatgaaa
gacagtcttgagcagagactaaagatgccagtatgcatggatccctcagatgaggaagag
gaggatgaagaggatatggaggttgagaaatcaactgtatcagatgaggaaatgtctgag
gaagagtttggggaaaaggtgaagcccagccaacgtacacctcgtgttgcagctggaaag
ggtcaaaagtctaagcgccgccgaattgtagtggcatctgacagcgatgattctggtgaa
gagttcaaacctgatcaggcaggaggtagcagcgaggatgaggatgaggaggatggagtg
agtagtggcactgaggaagagcaagagagcgagcctgagacagaaccagacagccctgtg
aaaccagtgaagcgcaaacgcacttccgagaagcctgctaaatcaaagaagttgatttcc
tcagacacctctaaacgagcacctgctgctcttccctctttggcatctaacaccaagtca
cgattatcagctttctctgctccagacaattttgagagtcaaaataacagtacgggtgga
acggatggaggttccactgtgtgggaccatgaaaaactcgactggcttaaggacggccgg
agaaaggatgcacagcgcaaacgtcagtctgatgaaaactacgaccccacaactctatac
gtacccgaggattttcttaacagaacaacacctggaatgcgccgttggtggcaactgaag
tcagagatgtttgataccgttctgttctacaaagtcggtaagttctacgagctgtaccac
atggatgctgtgattggtgtaaacgaattgggtttgaccttcatgaagggtacatgggcc
cactctggcttccctgagattggctttggacgtttctcagacgtacttgtgcaaaagggt
tttaaagtggctcgcgtggagcaaaccgagacccccgagatgatggaggcacgatgtaaa
gcaatggcacgtcctactaagtttgaccgtgtagtcaagcgagaagtttgcagaatcatc
acgcgtggcactcagacttacagcgtccttgatggtgcaccatcggaaactcaaagcaag
tatctgctgagtattaaagagaagagtgaggaagacagcgcaggtcatgggcatatctat
ggagtctgctttatcgatacctctgtgggacgcttccatgttggtcaattccaggatgac
cgacattgttcccgtctgcgtaccctggtggcacactattccccagcccaggttctgttt
gagaggggcaacccatctgctgagacacacaaaatttttaaggctatcttggcgtctgct
ctacaggaaggactcaatgctggttcacagttttgggatgcccaaaagaccctcaaggtc
cttgccgaggaagactacttcaaagaaagtccagggacgggcaatgatgatggcggatca
gtgcttcctctaactctcaaagcaatggcgtctgagagtgactctctaagtctgactcca
gagaaggggtacgaacttgccctttcagcacttggcggctgcatcttctacctcaagaaa
tgtcttgtggaccaggagcttctttccatgggcaactttgaggagtatgttcctgtggat
gtggagatggagcaggccggaggggcatcatgtttttttgcccagacccgtcaacgcatg
gttctggatggagtgacccttgccaaccttgagatccttcagaatagctctgggggtcaa
gagggtaccctacttgaacgattggacacgtgttgcactccctttggcaagaggctgcta
aagcaatggctctgcgcccctctttgcaatccgtcttctgttggggatcgcttagatgct
cttgaggatctgatgggggcaccatctcaagctaccgaagttacagacctgctgaagaag
cttccagatcttgagagactactgagtaaaatccacagcatgggtacccctttgaaaggt
caggatcacccggattcccgtgccgttctgtatgaggaggtcgtctacagcaagcgaaag
attgccgactttctctcagcacttgagggcttcaaggtcatgaaagaagttgtgtcgatc
atggatcccattgcagaagccttccaatcaaaactactacgacaggtggtgcgtcttgaa
aatgaagatggacttttcccagacctttcgccggagctcaaacgttgggacacagctttc
gaccatcagaaagctcgcaccacaggcgtcatcactccaaaagctggcttcgacccagag
tatgaccaggccctcaatggaattaaagactgtgagagaggcttgcaggaatacctggac
cgacagaagaagagattgggttgtaagaatctggcttattgggggacgggaaagaaccgt
taccaactagaagttcccgacagtgtttccgagaggagtgtacctgaggagtacgaggtg
agatccactaagaaaggctggaaaaggtactcgaccaaagagatcgagcagctgttttca
gagcttcagagctgggaggacaaacgagacactgcaatgaaggactgcatgagaagactt
ttctacaattttgacaaaaattacaaagactggcaaactgctgtggagtgcatggctgta
cttgatgtgctgttgagcatgtcacggtacagtcagagcggtgatgggcccatgacaaga
ccagagatggttctcccaggggatgggtctcagtcttcccccttcctggatctgagaggg
tctcgtcacccttgtgttaccaagaccttcttcggtgatgacttcattcctaatgacatc
ttcattggttgccctggcagtgaggaagatgagtgtcaagataataataaagcacttgct
ccttgtgtactagtcactgggccaaacatgggaggcaagtccaccctaatgagacagtgt
ggtctggtggtgatcttggcccagttgggctgttatgtgccagctgagagtttacgtctt
acccctgtggaccgagtcttcactcgccttggtgcctctgatcgcatcatgagtggtgaa
agcacattctttgtagagctcagtgagacggcaagcattctgctgcatgccaccaaccat
tcccttgtacttcttgatgaactgggcagaggtacggccacgtatgatggcacagccatt
gcgagtgcagtggtgaaggagttgtccgagaagatctgttgccgtaccttgttctccacc
cattaccactcactggtggaggaccacgcccaagatccagccgtgagacttggacacatg
gcatgcatggtggagaatgaatgtgaggacccgagtcaggagaccatcaccttcctgtat
aagttcattggtggtgcatgtcccaagagttacggctttaatgcagctcgactggctagt
attccagaggaggtcatccagtctggccataagaaggctagagagtttgagaggagcacc
gtgtccctcagagtattcaagaaattgtgctcatttgttgaagaccccggagctgctcgt
gaacagtttgccacattggttcgaatgatcggcaatcagtaa
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