Myxocyprinus asiaticus (Chinese sucker): 127414357
Help
Entry
127414357 CDS
T08782
Name
(RefSeq) DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
127414357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masi03400
]
127414357
DNA repair and recombination proteins [BR:
masi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
127414357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
127414357
NCBI-ProteinID:
XP_051508290
LinkDB
All DBs
Position
23:43934006..43943736
Genome browser
AA seq
1378 aa
AA seq
DB search
MAKQSSLFNFFTKSPPPAVQAKSNPSPVNADLSSAGRKSNTSPKEEEKVNCKKPPSKPVK
SQAKTGHAKLFGGKAVAAKESSSSMFSAGTLVWAKMEGYPWWPCMVVPQPLTGQQMRGRD
QDQRLHVHFFNEPPTRGWVNTKYIRDYQGSDSADAKSGGVFFSGKPVIHKAMELADVAMK
DSPEQRLKMPVCMDLSDEEEEDEVDMEVEKLTISDEEMSEEEVEEKVKPSRRTSRAAAEK
GHKSKRRRIVVASDSDDSGEELKPDQAGGSSEDDDVDEEDGVSSGTEEKESKPDTEPDSP
VKPVKRKHTSKKPAKSKNKSTSSDTPKRAPAALPSLASDTKSRLSAFSAPDNFDSQNSNS
TGGADGGSTVWDHEKLEWLQDGRRRDAQRKRQTDENYDPTTLYVPEDFLNRATPGMRRWW
QLKSEMFDTVLFYKVGKFYELYHMDAVISVNELGLTFMKGTWAHSGFPEIGFGRFSDVLV
QKGYKVARIEQTETPEMMEARCKAMARPTKFDRVVKREVCRIITRGTQTYSVLDGAPSET
QSKYLLSIKEKSEEESAGHGHIYGVCFIDTSVGRFHVGQFQDDRHCSRMRTLVAHYSPAQ
VLFEKGNPSAETLKIFKAILSSALQEGLSVGSQFWDAQKTLKVLAEEEYFKESPGMGNDE
GGSLLPSTLKAMTSESDSLCLTPKKGYELALSALGGCMFYLKKCLVDQELLSMGNFEEYV
PVDVEMEQAGGASCFFAQTRQRMVLDGVTLANLEIYQNSSGGQEGTLLDQLDMCCTPFGK
RLLKQWLCAPLCNPSSIGDRLDALEDLMGAPSQATEVTDLLKKLPDLERLLSKIHSMGTP
LKGQDHPDSRAVLYEEVVYSKRKITDFLAALEGFKVMKEVVLIMEPIAEAFRSKLLRQVV
LLKTENEDGLFPDLSPELKHWDTAFDHQKARTTGVITPKAGFDPEYDLALSGIKDSESGL
QEYLDRQKKRLGCKTLAYWGTGKNRYQLEVPDSVSERSVPEEYEVRSTKKGWKRYSTKEI
EQMFSELQSWEDKRDAALKDCMRRLFYNFDKNYKDWQTAVECMAVLDVLLSMSRYSQSGD
GPMARPEIVLPGDGSQSSPFLDLRGSRHPCVTKTFFGDDFIPNDIFIGCPGSEEVEVQDN
NKALAPCVLVTGPNMGGKSTLMRQCGLVVILAQLGCFVPAESLHLTPVDRVFTRLGASDR
IMSGESTFFVELSETASILLHATKHSLVLLDELGRGTATYDGTAIASAVVKELSEKICCR
TLFSTHYHALVEDHAQDPAVRLGHMACMVENECEDPSQETITFLYKFIGGACPKSYGFNA
ARLANIPEEVVQSGHKKAKEFERSTVSLRTFKKLCSFAEDPRADREQFAILVRMIGNQ
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcaaagctccctctttaatttcttcacaaagtcgcctcctcctgcggttcag
gccaaatccaacccatccccagttaacgcagatctgtcctcagctgggagaaagtccaac
acctcacctaaagaagaggagaaagtcaactgtaagaaacctccatcaaaacctgttaaa
tctcaggcaaaaactggacatgcaaaactgttcgggggaaaagcagtcgctgcaaaggag
agttcttcctccatgtttagtgctggtactttggtatgggccaagatggaaggctatccc
tggtggccctgtatggttgttccgcaacctctgaccggacagcagatgaggggccgcgac
caagatcagagacttcatgttcacttctttaatgagccaccaacacgaggctgggttaac
actaagtacataagagattatcaaggctctgatagcgcagatgccaaatcaggtggtgtg
ttcttcagtggaaagcctgtgatccataaggcgatggagctggcagatgttgcgatgaag
gacagtcctgagcagagactgaagatgccagtgtgcatggatctctcggatgaggaagag
gaggatgaagtggatatggaggttgagaaattaaccatatcggatgaggaaatgtctgag
gaagaggtggaggaaaaggtgaagcccagccgacgtacatctcgtgctgcagctgaaaag
ggtcacaagtccaagcgccgtcgcattgtagtggcatctgacagcgatgattctggtgaa
gagctcaaacctgatcaggcaggaggtagcagcgaggatgatgatgttgatgaggaggat
ggagtgagtagtggtactgaggaaaaagagagcaagccagatacagaaccagacagtcct
gtaaaaccagtgaagcgtaaacacacttccaagaagcctgctaaatcaaagaacaagtca
acttcctcagatacccctaaacgagcacctgctgcacttccctctttggcatctgatacc
aagtcacgattatctgctttctctgccccagacaactttgacagtcaaaatagtaacagt
acgggtggagcggatggaggttccaccgtgtgggaccatgaaaaactcgagtggcttcag
gacggccggagaagggatgcacagcgcaaacgtcagactgacgaaaactatgaccccaca
actctatacgtacccgaagactttcttaacagagcaacaccgggcatgcgccgttggtgg
caacttaagtcagagatgtttgataccgttctgttctacaaagttggtaagttctatgag
ctctaccacatggatgctgtgattagcgtcaacgaattgggtcttaccttcatgaagggt
acatgggcccattctggcttcccagagattggctttggacgtttctcagatgtacttgtg
caaaagggctataaagtggctcgcatcgagcaaaccgagactcccgagatgatggaggca
cgatgtaaagcaatggcacgtcccaccaagtttgaccgcgtagtcaagcgagaagtttgc
agaatcatcacgcgtggcactcagacttacagtgtccttgatggtgctccatcagaaact
caaagcaagtatctgctgagtattaaagagaagagtgaggaagagagcgcaggtcatggg
catatctatggggtctgctttatcgatacctctgtgggacgcttccatgtcggtcagttc
caggatgaccgacactgttcccgtatgcgtacattggtggcacactattccccagcccag
gttttgtttgaaaagggcaacccatctgctgagacactcaaaatctttaaggccatcttg
tcgtctgctctacaggaaggactcagtgttggttcacagttttgggatgcccaaaagacc
ctcaaggtccttgccgaggaagaatacttcaaagaaagtccagggatgggcaacgatgaa
ggtggatcattgctcccttcaactctcaaagcgatgacttccgaaagtgactctctatgt
ctgactccaaagaagggatatgaactagccctttcagcacttgggggctgtatgttctac
ctcaagaagtgtcttgtggaccaggagcttctttccatgggcaactttgaggagtatgta
cctgtggatgtggagatggagcaggccggaggggcgtcatgtttttttgcccagacccgt
caacgcatggttctggatggggtgacccttgccaatcttgagatctatcagaatagctct
gggggtcaagagggtaccctacttgatcaattggacatgtgttgcactccttttggcaag
agactgctgaagcaatggctctgcgcccctctttgcaatccatcttctattggggatcgg
ttagatgctcttgaggacctgatgggtgcaccatcccaagctaccgaagttacagacctg
ctgaagaagctcccagatcttgaaagacttctgagtaaaatccacagcatgggtacccct
ttgaaaggtcaggaccacccggactcccgtgccgttctgtacgaggaggttgtctacagc
aagcgaaagatcactgattttcttgcggcacttgagggcttcaaagtcatgaaagaagtt
gtgttgatcatggagcccattgcggaagccttccgatcgaaactactacgacaggtagtg
cttctaaaaactgaaaatgaagatggacttttcccagacctttcgccagagctcaaacat
tgggacacagctttcgaccatcagaaagctcgcaccacaggcgtcatcactccaaaagct
ggcttcgacccagagtatgacctggccctcagcggaattaaagactctgagagtggcttg
caggaatacctggaccgacagaaaaagagattgggttgtaagactctggcttattggggg
acgggaaagaaccgataccaactagaagttcccgacagtgtttctgaaaggagcgtacca
gaggagtacgaggtgagatccaccaagaaaggctggaaacggtactcgaccaaagagatc
gagcagatgttttcagagctacagagttgggaggacaaacgagatgctgcactgaaggac
tgcatgagaagactcttctacaattttgacaagaattacaaagactggcaaactgctgtg
gaatgcatggctgtacttgacgtgctgttgagcatgtcccggtatagtcagagcggtgat
ggacccatggcaagaccagagatagtgctcccaggggatgggtctcagtcttcccccttc
ctggatctgagagggtctcgtcacccatgtgtcaccaagactttcttcggtgatgacttc
atcccaaatgacattttcattggttgtcctggcagtgaggaagtagaggttcaagataac
aataaagcacttgctccgtgtgtactagtcactgggccaaacatgggaggcaagtctacc
ctaatgaggcagtgtggtctggtggtgatcttggcccagttgggctgttttgtgccagct
gagagtttacatcttacccctgtggaccgagtcttcactcgccttggtgcctctgatcgc
atcatgagtggtgagagcacattctttgtagagctcagcgagacagcgagcattctgctg
catgccaccaagcattccctcgtacttcttgatgaactgggcagaggtacggccacatat
gacggtacggccattgcgagtgcagttgtgaaagagttgtccgagaagatctgttgccgc
accttgttctccacacattaccatgcactggtggaggaccacgcccaagatcctgccgtg
agactcggacacatggcatgtatggtggagaatgaatgcgaggacccaagtcaggagacc
atcaccttcctgtacaagttcattggtggcgcgtgtcccaagagttacggcttcaatgca
gcacgactggctaatattccagaagaggtcgtccagtctggccataagaaagccaaagag
tttgaaagaagcactgtgtctctcagaacattcaagaaattgtgctcatttgccgaagac
cccagagctgatcgtgaacagttcgccatattggttcgaatgatcggcaatcagtaa
DBGET
integrated database retrieval system
