Myxocyprinus asiaticus (Chinese sucker): 127415136
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Entry
127415136 CDS
T08782
Name
(RefSeq) hepatocyte nuclear factor 1-alpha-like isoform X1
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
masi03000
]
127415136
Transcription factors [BR:
masi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
127415136
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
127415136
NCBI-ProteinID:
XP_051509670
LinkDB
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Position
24:31104859..31120172
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AA seq
559 aa
AA seq
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MDGGDGRRAGGERSGQLSALQEQLVWSLLGSGLSKELLIQAMGDLERERASTGVERADRA
DGESSEDGEMDNPPPIFRELEMLPPEEAARQRAQVEHLLQEDSWHVAKMVKSYMQQHNLP
QREVVESTGLNQSHLSQHLNKGTPMKNQKRATLYSWYVKKQAEISQPEFTNASRGVVSGE
ESGEDGRKGRRNRFKWGPASQQILFQAYERQKNPSKDEREGLVEECNRAECLQRGVSPSQ
LAGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDVPYSSQSAPPTGQTLPSSPSPGLKYS
QSVVCENLGTIRSSSGEDRGGGGHLGASPGQLEPSHTLLDTHHHRPTSGGGSLPPVSTLT
SLHGVSGSSAPPPGLIMASLPSVMSLGDSSLLIGLTSSQQQTVINNVGGGFTTLQPISFQ
QHLHTQQPMTNQLQSHIGSSSFMATMAQFPCHTYSKADLTCYPSSLLSQAMVIADSNSIG
TLTNLTAVRQILTSDPEGHTDTPIDDESLHLQSTSPEPVSSGSLELYTQTSETHPSHLLS
SSPGDIDPYIPTQMVSTAQ
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggatggaggagatggcaggagagccggaggagaacgaagtggccaactgtctgccttg
caagagcagctggtctggtctctactgggctcagggttatcaaaggagttgctgatccag
gccatgggagatctggagagagagcgggcatcaactggtgtggagagggcagaccgggca
gatggagagagctcggaggacggagagatggacaatccacctcccattttccgtgagctg
gagatgcttccaccggaggaggccgcgagacaaagagctcaagttgaacatctgttgcaa
gaagattcttggcatgtagctaaaatggtgaagagctacatgcagcagcacaatctacca
cagagagaggtggtagagtccaccggtctcaaccaatcacatctctcccaacacctcaac
aagggcacgcccatgaagaatcaaaaacgtgccacattgtatagctggtatgtcaagaaa
caggcagagattagccagccagaattcaccaacgccagtcgaggtgttgtgtcaggagag
gaatctggggaggatggccgaaagggacggaggaatcgattcaaatggggccctgcctcc
caacaaatcctcttccaggcttatgaacgacagaagaaccctagtaaagatgagagggag
ggattggtggaggagtgtaacagagcggagtgtctacaaaggggagtgtctccttctcag
ctagctggtctgggctctaatctggtgacagaggtacgtgtatataactggtttgccaat
cggcgcaaggaggaggcatttcgccacaaactggcactggacgtgccttacagcagccaa
tcagcaccccccacaggccagactctaccatccagtccttcaccaggtctgaagtacagt
cagtcagttgtgtgtgagaatttgggcacaataagaagctcaagtggtgaagataggggt
ggcggcggtcatctgggagccagtccaggccagctagaacccagccatacactcttggac
acacatcaccacagaccaacatcaggaggtggttccttacctcctgttagtactctcact
tctttgcatggagtatcaggatcctcggctccccctccaggactgattatggcctcgcta
ccgagtgtaatgagtctgggggattcctcacttctcataggcttgacatcctctcaacaa
cagactgtgatcaacaatgtagggggtgggtttaccaccctccaaccaatctcattccag
cagcaccttcatactcagcagccaatgacaaaccagcttcagagtcacattggctctagc
tcgttcatggcaacaatggcccagtttccatgccacacgtacagcaaggcagacctgacc
tgttacccctctagtctcctatcccaggctatggtcatcgcagacagcaacagcattggg
acactgaccaacctaacagctgttcgacagattctcacctcagatcctgagggtcacaca
gacactcccattgatgatgagtctttacacctacaatcaacttcaccagagccagtgtct
tcaggcagcttggagctctacactcagacgagcgagacccatccttctcacctgctctct
tcttcaccaggggacatagacccttacatccctacacagatggtctccactgcacaatag
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