Myxocyprinus asiaticus (Chinese sucker): 127417944
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Entry
127417944 CDS
T08782
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
127417944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127417944
Enzymes [BR:
masi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
127417944
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
127417944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
HMG_box_2
HMG_box
Motif
Other DBs
NCBI-GeneID:
127417944
NCBI-ProteinID:
XP_051514189
LinkDB
All DBs
Position
27:complement(39800903..39832995)
Genome browser
AA seq
1700 aa
AA seq
DB search
MLFSKEAPWRRLEGMSFGLFSAKEIRKLSVKTVTNAQLLDNVGNAAANGLYDLSLGPADN
KEICSTCMQDFNSCPGHFGHIDLPLPVYNPLFFDKLFLIIRGSCLTCHMLTCPRAAVHLL
LCQLKLLDVGAMKEVYELENVLNQFLEVNPQPSGVQIQEVLEEFISPFLKANEDNQHTAP
IKHVCEKKSSLINNFWKIHMNSKKCPNCRASSVKVRKEHNSKLIVTHASATTDSELKDDD
LQLTNRGYLTPSLAQEHVIKLWEKEGFFLRYLFTGCDMNSLEKGFNHEVFFLELLVVPPC
RYRPVNRVGDQMYTNGQTVNLQAVLKDNFIIQKLLAMIAAEKTQAIEGTQTELEQSSETT
QISQIDQTFLTGIPGLTLTDKLYNVWIRLQSHVNIVFDSDMDKLITEKFPGVRQLLEKKE
GLFRKHMMGKRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVL
NGPNVHPGASMVINEDGSRTILSSTNLTQREAVAKQLLTPSTGQHRIPMKIVNRHIKNGD
VLLLNRQPTLHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRA
EAYTLVSTDQQYLVPKDGKPLAGLIQDHMVSGTSMTIRGCFFTRDQYTALIYRGLTDKIG
RVKLLPPALIKPVTLWTGKQVVSTLLLNVIPENSIPLNLLGKAKIPGKAWVKEPPRAVPG
YNPDIMCESQVVIRQGELLLGVLDKAHYGSSAYGLVHCCYELYGGETSGKLLSCLARLFT
AYLQLYRGFTLGVEDILVKGGANKQRRKIIKESFKCGSKALKAAFNLPSTTGENEARERW
QDAHLNTDQRDFNMVDLKFKEEVNQVNNNINKVCMPLGLHRPFPENNLQLMVQSGAKGST
VNTMQISCLLGQIELEGRRPPLMPSGKSLPCFQPYEPQPRSGGFVTGRFLTGIKPPEFFF
HCMAGREGLVDTAVKTSRSGYLQRCVIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDI
PKTQFLQPRQFPFIKDNYEVIRKSKCLDEVLAKMDPQATFNHFNAIKRWKAKHERLSPRD
SAFLLYSQKKLGKIKTQTGGQELANGREAATLQLVEKWRSLDESGRMKYLKKSSHCPDPC
LALYRPDICFGSVSETFDSIVESYLNQFNVKQEFQTSSDNIDADRLRSLLQLKWQRALCD
PGEAVGLLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMIASANIKTPMMSI
PVLMNKKAMKRVKMLRKKLTRVCLSEVLHKVDVMETFRVEGKVRQKSRVFKLTFHFLPPE
RYQQDKLLIPQQILQYMEQKFFRLMWEAIKKLNAKLASISAVETRRVTAREGEQDVNVNP
GREDGGDEDAENSRIVDDEANEGDADATDSRRKEKQEEEVDYESEEGEEGSNDEREDVAK
DTQEEAGTPELPEEEGSNENPSPVQTQSTEQLKGESQESLRINTVLQINSAFEDYKYDTE
NGLWCELTLVLPITKVHFDLTSVVVKQAQNAVIMETKGITRCLLNEVTKKDGSKELVLNT
EGINMQELFRHADILDLNRLYSNEVHAMANTYGIEVALRVIEKEIKDVFAVYGIEVDPRH
LSLVADYMCFEGVYKPLNRFGIQSNSSPLQQMTFETSYKFLKQATMLGSYDKLSSPSACL
VVGKLVKGGTGLFDLKQPLQ
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgctattttcaaaagaagcgccatggagacgattagagggcatgtcgtttggcttgttc
tccgctaaggaaataaggaagctgagtgtgaaaactgtcaccaatgcccaactgttggac
aatgttggcaatgctgcagcaaacggcctgtatgatctttcactgggtccagctgataac
aaggagatctgctcaacctgcatgcaggacttcaacagctgtccagggcactttggccac
atagatctacccctgccagtctacaaccctctgttctttgataaactatttttgatcatc
cggggttcatgtctgacctgtcacatgttgacatgtccgagagcggccgttcatttactg
ctgtgccagctgaagctcctggatgtgggggcgatgaaggaggtctatgaacttgagaat
gttctcaatcagtttttggaggtcaaccctcagccatctggagtacaaatccaagaagtt
ttggaggagtttatatcgccctttctcaaagccaatgaagacaatcagcacactgctcct
atcaaacatgtctgtgagaagaaaagcagtctcatcaacaatttctggaaaatacacatg
aactcaaagaaatgcccaaattgcagagccagttcagtgaaagtgcgcaaagaacacaac
agcaaactcattgtcacacatgcatctgccacaacagactcagaactaaaggatgatgac
ttgcagctgaccaaccgtggatatttgactccaagtttagctcaagagcatgtcatcaaa
ctttgggagaaggaaggctttttccttaggtatctcttcacagggtgtgacatgaacagt
ttagagaaaggcttcaatcatgaagttttcttcttagagcttctggtggttcctccatgc
aggtacagacctgttaatcgggtaggagaccagatgtacaccaatggtcagactgtgaac
ctgcaggccgtgttaaaggataatttcatcattcagaagttgctcgcaatgatcgcagcg
gagaagacccaagccattgaaggcacacagacggagttggagcagtccagtgaaactaca
cagatcagtcagatagatcagaccttcttaacgggcatcccaggactgacactcacagac
aagctctacaacgtctggatccgtctacagagtcatgtcaacatcgtgtttgacagtgac
atggacaaactgattacagagaagttccctggagtccgtcagctcttggagaagaaagag
ggtttgttcaggaaacacatgatggggaagcgagtggattacgccgctcgctctgtcatt
tgtcctgacatgtacatcggaaccaatgagattggaataccaatggtttttgctaccaaa
ttgacgtacccgcagccggtgacaccgtggaatgtgaaggaacttcggcaagctgtgctg
aatggacccaatgttcaccctggagcctctatggtcattaatgaagatggatccagaacc
atcctcagcagtactaacctgacccagagagaagctgttgccaaacagctcctgacaccc
agcactggacagcacaggatacccatgaagattgtcaatcgtcacatcaagaacggagac
gtgctgctgttaaatcgtcagcccactctccacagaccatctatccaggctcactgcgct
cggatcctgcccggagagaaagtgctccggttacattatgctaactgtaaagcctacaat
gctgactttgacggtgatgagatgaacgctcacttccctcagagtgagctgggacgtgcc
gaggcctacacgctagtgagcacagatcaacagtacttggtgcctaaagacgggaagccg
ctggctggtctgattcaggatcacatggtgtccggcaccagcatgaccatccgtggctgt
ttttttacacgggatcagtacactgctttaatctacagaggcttgacggacaagattggc
agagtaaagctcctcccccccgcactcattaaaccagttacgctctggactggtaaacag
gtggtatcgaccctattgctgaatgtcattcctgaaaacagcatccctttgaaccttttg
ggaaaggcaaagattcctggtaaagcctgggtgaaggagcctcccagagccgttccagga
tacaatccagatattatgtgtgaatctcaggtggtgattcgtcagggagagcttttgctc
ggggttctggataaagctcattacggcagctctgcgtacggtctggttcactgctgttat
gagctctacggaggagagaccagcggcaaactgcttagctgtctggcacgactcttcact
gcctacctgcagctttaccgcggtttcaccttgggtgtggaggacattctagtaaaagga
ggagccaacaaacaaagaagaaaaattatcaaagaatcattcaaatgtggctccaaggct
ctgaaggcggcatttaatctgccttcaactactggagagaacgaggccagggaacgctgg
caagacgcccatctgaacactgaccagagagatttcaacatggtggacctgaagttcaag
gaggaggtcaatcaagtgaacaacaacatcaacaaggtgtgcatgccgctgggtctccac
cgccccttccctgaaaacaacctacagctcatggtgcagtctggagcgaaaggttcaact
gttaataccatgcagatctcgtgtttgttgggtcagatcgagttggagggccgccggccg
ccactgatgccttctgggaaatctctgccctgttttcagccctatgaacctcagccacgc
tctggaggattcgtcacgggcagattcctgacgggcatcaaacctcctgagttctttttc
cattgtatggctggtcgtgagggtcttgtggacactgctgtcaaaaccagtcgatctggt
tatctgcagaggtgtgtaatcaagcatctagagggtctcgtggtacagtatgatctgact
gtgagagacagtgatgggagtgtggttcagtttctctacggagaggatggactggatatt
cccaagacacagtttctacagccacggcagttccctttcatcaaagacaactacgaggtt
ataagaaagtctaagtgcttggatgaagttctggctaaaatggacccacaggctacattt
aatcactttaatgccataaagagatggaaagccaaacatgaacgcctctcacccagagac
agcgccttcctgctgtattcccaaaaaaaactgggcaagataaagactcaaactgggggc
caggaactggccaatgggagagaagcagccactttacagcttgtggagaagtggagatct
cttgatgagtctggccgtatgaagtatttgaagaagagctctcattgtccagacccgtgt
ctggcactttaccggccggacatctgcttcggttcagtgtctgagacttttgactccatt
gttgagtcctacctgaatcagttcaacgttaagcaggaatttcaaacatcctctgacaac
attgacgcagatagattgcgaagtctcctgcagttaaagtggcagcgtgctctgtgtgat
ccaggagaggccgtggggctgctggccgctcagagcgttggtgaaccctccacacaaatg
actctcaacaccttccactttgcaggcagaggagagatgaatgtcaccctggggataccc
agattgagagaaatcctcatgattgccagcgcgaacatcaaaacccccatgatgagtatt
ccagttcttatgaacaaaaaagccatgaagcgtgttaagatgctacgtaaaaagctaaca
cgtgtgtgtttgtcagaggtgcttcacaaggtggatgtgatggaaactttccgtgtagaa
gggaaagtgagacagaaatcacgagtcttcaaactcactttccacttcctgcctcctgaa
cgttaccagcaagacaagctgctcattcctcaacagatccttcaatacatggagcaaaaa
ttctttcgtctgatgtgggaggccattaagaagctgaacgccaaactggcatccatcagt
gcggtggagactcgcagggtcacggcaagagaaggcgagcaagatgtaaacgtcaacccg
ggaagagaggacggtggcgatgaggatgcagaaaacagcagaattgtggatgacgaggca
aacgagggagacgctgatgcaacagatagcaggagaaaagagaaacaagaagaagaggtg
gactatgagagtgaggagggagaggagggcagcaatgatgaacgagaggatgtggctaag
gacacacaggaagaggcaggtactccagagctccctgaagaggagggatccaatgaaaac
ccatcgccagtccagacccagagtactgaacaattaaagggagaatcacaggagtctctg
aggattaatactgtgctgcaaataaactctgcctttgaggattacaaatacgacacagaa
aatggcctgtggtgtgagctgaccctggtcctgcccatcactaaagtgcactttgacctc
acgtcagtggtggtgaagcaggcccagaatgctgtgatcatggagaccaagggcatcaca
cgctgcctgctaaatgaggtcaccaaaaaagacggaagcaaagagctggtgctgaacacg
gagggaatcaacatgcaggagctgttcagacatgctgatatcctggacctgaaccggtta
tactccaacgaggttcacgccatggccaacacgtatggcattgaggtggccctcagggtc
attgagaaagagattaaggatgtgtttgctgtttatggtattgaggtggacccacgtcac
ctctctctagtggctgactacatgtgttttgagggggtgtacaagcctctcaaccggttt
ggtattcagtccaacagctccccactgcaacagatgacattcgagaccagttacaagttc
ttgaagcaagccacaatgctgggttcttatgataaactgagttcgccatcagcttgcttg
gttgtagggaaacttgtgaaaggtggaaccggcctcttcgatctgaaacagccattacag
taa
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