KEGG   Massilia sp. YMA4: DPH57_11440
Entry
DPH57_11440       CDS       T05528                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
masy  Massilia sp. YMA4
Pathway
masy00740  Riboflavin metabolism
masy01100  Metabolic pathways
masy01110  Biosynthesis of secondary metabolites
masy01240  Biosynthesis of cofactors
masy02024  Quorum sensing
Module
masy_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:masy00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    DPH57_11440 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DPH57_11440 (ribD)
Enzymes [BR:masy01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     DPH57_11440 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     DPH57_11440 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AXA94684
UniProt: A0A7U6B7E3
LinkDB
Position
complement(2685936..2687021)
AA seq 361 aa
MRLALQWAGKGLYTTSPNPHIGCVIVKDGVVIGAGVTQPVGQDHAEIQALKDAARRGHDV
RGATAYVTLEPCSHYGRTPPCCDALVRAGLGRVVAAMEDPNPLVAGQGMARLAAAGIEVA
VLSGPLADEAHELNIGFFSRMRRQLPWVRLKTAASLDGMTALHDGSSQWITGAAARADGH
AWRARACAILTGIGTVKADDPQLNVRAVETPRQPRRIVVDSRLEIDPNAKVLAGGGTLVV
AAVRDHDKEARLRDLGAEVITLANAHGKVDLPELMRELGRRQVNELHVEAGTKLNGSLVR
ERCVDELLVYLAPTLLGDAQGMFALPALASLEHKRTLKFHEVRSVGEDLRILARFTDQAT
N
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgcgcctggccctgcaatgggcggggaaggggctgtacacgacctcgcccaacccgcac
atcggctgcgtcatcgtcaaggatggcgtcgtcatcggcgcgggcgtcacgcagcccgtc
ggccaggatcacgcggaaatccaggcgctgaaggacgcggcgcggcgcggccacgacgtg
cgcggcgcaacggcctacgtcaccctggaaccgtgcagccattacggccgcacgccgccc
tgctgcgacgcgctggtgcgcgccgggctggggcgggtggtggcggcgatggaagacccg
aatccgctggtggcggggcagggcatggcgcggctggcggcagccggtatcgaggtggcg
gtgctgtcaggcccgctggcggacgaggcccatgaactgaatatcggcttcttctcgcgc
atgcgccgtcagctgccttgggtgcgcctgaagacggcggccagcctggacggcatgacg
gcgctgcacgacggcagcagccaatggatcacgggcgcggcggcgcgcgccgacgggcat
gcctggcgcgcccgcgcctgcgcgatcttgaccggcatcggcaccgtcaaggccgacgat
ccgcaactgaacgtgcgcgccgtcgagacgccgcgccagccgcgccgcatcgtggtggac
agccggctggaaatcgatccgaacgccaaggtgctggccggcggtggcacgctggtcgtc
gcggctgtgcgcgatcacgacaaggaagcgcggctgcgcgacctgggcgcggaggtcatc
acgctggccaatgcgcatggcaaggtggacctgccggaactgatgcgcgagctgggccgg
cgccaggtcaacgagctgcacgtggaggcgggcaccaagttgaacggctcgctggtgcgc
gaacgctgcgtcgacgagctgctggtctacctggcgcccaccctgctgggcgacgcgcag
ggcatgttcgcgctgcctgcgctggccagcctagaacacaaacgcaccctgaaatttcat
gaggtgcgcagcgtcggcgaagacctgcgcatcctggcccgcttcacggaccaagccacc
aactag

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