Massilia sp. YMA4: DPH57_14565
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Entry
DPH57_14565 CDS
T05528
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase molybdopterin binding subunit
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
masy
Massilia sp. YMA4
Pathway
masy00230
Purine metabolism
masy01100
Metabolic pathways
masy01120
Microbial metabolism in diverse environments
masy01232
Nucleotide metabolism
Module
masy_M00958
Adenine ribonucleotide degradation, AMP => Urate
masy_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
DPH57_14565 (xdhB)
Enzymes [BR:
masy01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
DPH57_14565 (xdhB)
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GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
DUF6055
Motif
Other DBs
NCBI-ProteinID:
AXA92256
UniProt:
A0A7U5XZI0
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All DBs
Position
complement(3447606..3449984)
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AA seq
792 aa
AA seq
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MNHPVTPGLTDAWKAVGVARPHESAELHVLGQATYTDDIPEVHGTLHAALGLSAKAHARI
VALDLAPVLACPGVVAAYTASDIPGTNDCGPIIHDDPIFAQGEVLYVGQPIFIVVADTHT
NARRAARKAVVTYEELPAILTPQQAKAASSYVLPPLRLQRGDAQAAFERAPHVLKGELFV
GGQEQFYLEGQIAYAIPKENRGMLVQCSTQHPSEMQHVVAHALGLHSHHVTVECRRMGGG
FGGKESQSALWAAAAAIAATLTKRPVKLRADRDDDMMVTGKRHCFWYEYEVGYDDDGRIV
AARVDMTLRAGFSADLSGPVATRAVCHFDNAYYLSDVDIRAGCGKTNTQSNTAFRGFGGP
QGAIAIEYVIDEIARNLGRDALDIRRLNFYGKTERNETPYRQVIVDNVIDELTTELERSS
EYRARRESIAAFNATSPVLKKGLALTPVKFGIAFNVTHLNQAGALVHVYVDGSVLVNHGG
TEMGQGINTKVMQVVAHELGVDLRHVRASATDTSKVANTSATAASTGADLNGKAAQDAAR
QIRERLAAFAVKQYGGDVAAVRFGADLVHVNGHEVPFPELVQKAYLARVQLWSDGFYATP
GLHWDPKTMTGHPFSYYAYGAAVSEVVVDTLTGEWKLLRADALYDAGASLNPAIDIGQVE
GAFIQGMGWLTTEQLWWNDAGKLMTHAPSTYKIPGISDCPEDFRVRLFDNRNVEDSIHRS
KATGEPPLLLPFSVFFAIRDAISSVGEHRVNPPLNAPATSEEILKAVDAVQGSVANKMGS
VPIFEATVSDGK
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatcccgtcactcccggcctgaccgacgcctggaaagccgtcggcgtggcccgc
ccgcacgagtcggccgagctgcacgtgctgggccaggccacctataccgacgacatcccg
gaagtacacggtaccctgcacgcggcactgggcctgtccgccaaggcgcacgccaggatt
gtcgcgctcgatctggcgcccgtgctggcctgccccggcgtcgtcgcggcctacacggcc
agcgacatcccgggcaccaacgactgcggcccgatcatccacgacgacccgatcttcgcc
cagggcgaggtgctgtacgtgggccagccgatcttcatcgtggtggcggacacgcacacc
aatgcgcgccgcgccgcgcgcaaggccgtcgtcacgtacgaggagctgccggcgatcctg
acgccgcagcaggccaaggccgccagttcctacgtgctgccgccactgcggctgcagcgc
ggcgacgcgcaggccgcgttcgagcgcgcgccgcacgtcctcaagggcgagctgttcgtc
ggcggccaggaacagttctacctggaaggccagatcgcctatgccatcccgaaggaaaac
cgcggcatgctggtgcagtgctccacccagcatcccagcgagatgcagcacgtcgtcgca
cacgcgctggggctgcattcgcaccacgtgaccgtcgaatgccggcgcatgggcgggggc
ttcggcggcaaggaatcgcagtcggcgctgtgggcggcggcggcggccatcgccgccacg
ctgacgaagcggccggtaaaactgcgtgccgaccgcgacgacgacatgatggtcaccggc
aagcgccactgcttctggtacgagtacgaagtgggctatgacgacgacggccgcatcgtc
gccgcgcgggtcgacatgaccctgcgcgccggcttctcggccgacctgtccggccccgtc
gccacgcgcgccgtctgccacttcgacaatgcctactacctgtcggacgtggacatccgc
gccggctgcggcaagaccaacacgcaatcgaacaccgcgttccgcggcttcggcgggccg
cagggggcgatcgccatcgaatacgtcatcgacgagatcgcgcgcaacctgggccgcgac
gcgctggacatccgccgcctgaatttctacggcaaaaccgaacgcaacgagacgccgtac
cgccaggtcatcgtcgacaacgtcatcgacgagctgacgacggaactggagcgcagcagc
gagtaccgcgcccgccgcgagagcatcgccgcgttcaacgccaccagtcccgtgctgaag
aagggcctggcgctgacgccggtgaaattcggcatcgcgttcaacgtcacgcacctgaac
caggccggcgcgctagtgcacgtctacgtggacggctccgtgctggtcaaccacggcggc
accgagatggggcagggcatcaacaccaaggtgatgcaggtggtcgcgcacgagctgggc
gtggacttgcggcacgtgcgcgccagcgccaccgatacgagcaaggtcgcgaatacgtcc
gccaccgcggcctccaccggcgcggacctgaacggcaaggccgcgcaggacgcggcgcgc
cagatccgcgagcgcctggccgccttcgcggtcaagcagtacggcggcgacgtcgcggcg
gtgcgcttcggcgcggacctggtgcacgtcaatggtcacgaggtgccgttccccgagctg
gtacagaaagcctacctggcgcgcgtgcagctgtggtcggacggtttttatgccaccccg
ggtctgcactgggacccgaagacgatgacgggccatccgttctcgtactacgcctatggc
gcggccgtctcggaagtggtggtggacacgctgacgggcgaatggaagctgctgcgcgcg
gatgcgctgtacgacgccggcgcctcgctcaacccggccatcgacatcggccaggtcgag
ggcgccttcatccagggcatgggctggctgaccacggagcagctgtggtggaacgacgcg
ggcaagctgatgacgcatgcgccgtccacctacaagatccccggcatctcggactgcccg
gaagacttccgcgtgcgcctgttcgacaatcgcaacgtcgaagacagcattcatcggtcc
aaggcaacgggcgagccgccgctgctgctgccgttttccgtgttcttcgctatccgcgac
gcgatctccagcgtgggcgagcaccgggtcaatccgccgctgaacgcgccggcgaccagc
gaggaaatcctcaaggccgtcgacgcggtgcagggaagcgttgcaaacaaaatggggtct
gtccccatttttgaggcaacagtttcggacggcaaatga
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