Massilia sp. YMA4: DPH57_24260
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Entry
DPH57_24260 CDS
T05528
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
masy
Massilia sp. YMA4
Pathway
masy00053
Ascorbate and aldarate metabolism
masy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
DPH57_24260 (garD)
Enzymes [BR:
masy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
DPH57_24260 (garD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Motif
Other DBs
NCBI-ProteinID:
AXA93972
UniProt:
A0A7U5Y2U3
LinkDB
All DBs
Position
complement(5623620..5625179)
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AA seq
519 aa
AA seq
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MTASTPRRIHMHENDNVAIVVNDGGLPAGTVFPDGLTLVEGVPQGHKVALIDLAQGDAVV
RYNVTIGRAAKAIPKGSWVSEQLLEMPAARELDNLPIATVKPAAQPPLEGYTFQGFRNED
GSVGTRNILAITTTVQCVSGVVEFAVKRIKAELLPRYPNVDDVVGLEHTYGCGVAIDAPN
AMVPIRTLHNISKNPNFGGQAMVVSLGCEKLQPTRLFPKGSIPIREADNSVADEAPVVCL
QDSHHVGFMSMIDSIMQTAEQQLEVLNRRQRVTCPASDLVVGVQCGGSDAFSGVTANPAV
GFATDLLVRAGATVMFSEVTEVRDGIDQLTSRAVNEEVAQAMIREMDWYDNYLKRGGVDR
SANTTPGNKKGGLSNIVEKAMGSIVKSGSSPISGVLSPGEKLTTKGLIYAATPASDFVCG
TLQLAAGMNLHVFTTGRGTPYGLAEVPVIKVATRDDLARRWHDLMDVNAGRIATGEATIE
SVGWELFQLMLDVASGKKTWAEHWKLHNALVLFNPAPVT
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgagcactccgcgccgtatccacatgcacgagaacgacaatgtggcgatcgtc
gtcaacgacggcggcctgccggccggcaccgtgttccccgacggcctgacgctggtcgaa
ggcgtcccgcaagggcacaaggtggcgctgatcgacctggcgcagggcgatgccgtggtc
cgctacaacgtgacgatcgggcgggccgcgaaagccatcccgaagggcagctgggtctcc
gagcagctgctggaaatgccggccgcgcgcgaactggataacctgccgatcgccaccgtc
aaaccggcagcgcagccgccgctggagggctacacgttccagggcttccgcaacgaggac
ggttcggtcggcacccgcaacatcctggcgatcacgacgaccgtccagtgcgtgtccggc
gtggtggagttcgccgtcaagcgcatcaaggccgagctgctgccgcgctatccgaacgtg
gacgacgtggtcggcctggaacacacctatggttgcggcgtggcgatcgatgcgccgaac
gcgatggtgccgatccggacgctgcacaacatcagtaagaacccaaatttcggcggccag
gccatggtcgtttcgctgggctgcgagaagctgcagcccacgcgcctgttcccgaaaggc
tcgatcccgatccgcgaggccgacaacagcgtcgccgacgaggcgcccgtcgtctgcctg
caggacagccaccatgtcggcttcatgtcgatgatcgactcgatcatgcagacggccgaa
cagcagctggaagtgctgaaccggcgccagcgggtcacgtgcccggcctcggacctcgtc
gtcggcgtgcaatgcggcggcagcgatgcgttctccggcgtgacggccaatccggcggtg
ggcttcgccaccgacctgctggtgcgcgcgggtgccaccgtgatgttctcggaagtgacg
gaggtgcgcgacggcatcgaccagctgacgtcgcgcgccgtcaacgaggaagtggcccag
gccatgatccgcgagatggactggtacgacaattacctgaagcgaggcggcgtcgaccgc
agcgccaatacgacgccgggaaacaagaagggcgggttgtccaacatcgtcgagaaggcg
atggggtcgatcgtcaagtccggcagcagcccgatctccggtgtgctgtcgccaggcgag
aagctgacgacgaaaggcctgatctacgcggccacgccggcctcggacttcgtctgcggc
acactgcagctggccgccggcatgaacctgcacgtcttcacgacgggccgcggcacgccc
tacggcctggccgaagtcccggtcatcaaggtggccacgcgcgacgacctggcgcgccgc
tggcacgacctgatggacgtgaacgctggccgcatcgccaccggcgaggcgaccatcgaa
agcgtcggctgggagttgttccagctgatgctcgatgtcgccagcggcaagaagacgtgg
gccgaacactggaagctgcacaatgcgctggtgctgttcaaccccgcgccggtgacgtga
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