Pseudoduganella armeniaca: C9I28_25505
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Entry
C9I28_25505 CDS
T05378
Name
(GenBank) tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
masz
Pseudoduganella armeniaca
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
masz03016
]
C9I28_25505
Enzymes [BR:
masz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
C9I28_25505
Transfer RNA biogenesis [BR:
masz03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
C9I28_25505
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
FAD_binding_3
Pyr_redox_2
NAD_binding_9
TrkA_N
GIDA
FAD_binding_2
AlaDh_PNT_C
HI0933_like
Pyr_redox
ApbA
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AVR98612
UniProt:
A0A2R4CGE6
LinkDB
All DBs
Position
complement(5863261..5864949)
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AA seq
562 aa
AA seq
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MRRVVLDTGFGQGEHLAAARAAARVAGIPLHYIALLAELPPAQALADPALRAAWPTAVPG
LHRLELDDGRTTLDVLLGDVETNLGEVTARVDEFFVPTPLASPRMLGKLALPAARLLACD
GDDTWRRGLRAAGFSWQEDGAPGWLEARYTSRKPQAPRPAPPVRSAIVIGAGVAGSAACE
RLCARGWDVTLLERHAEPATEASGNRAGIFMPLLSRDDNIPTRLTRAAFLYALRHWRYLG
GLSPAGEPMLGAQCGVLQLARDADHAALQREVVEQWRYPEAFVRWLDAGTAAGLLGAPTP
DGAWLFAQGGWANPASICRAMLAACGERLCRIFSAAAVRLERRDGLWHAIGADETVLASA
AHAIVANGAGALTLEQTAALPLYTMRGQVTHVDAADFAALPLVVCREAYMTPPVNGIVSV
GATYDKDDERALRAASQAENLARAREILGPARVPDELPLQGRVGLRCMAPDRLPLVGALP
DYAAPGRPERLRDVARLPNLHALLGYASRGLIWAPLAAELLAAMLEDEPLPLEASLAAAL
DPGRFLLKERKRQGPPSVASAP
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgggtcgtcctcgataccggcttcggccagggcgagcacctggctgcggcgcgt
gccgccgcgcgggttgccggcattcccctgcactacatcgcgctgctggcggaactgccg
cccgcgcaggcgctggccgatcccgcgctgcgcgccgcctggccgaccgcggtaccgggg
ctgcaccggctggagctggacgatggccgcaccacgctcgacgtcctgctgggcgacgtc
gagaccaacctgggggaagtgacggcgcgggtcgacgagttcttcgttcccacgccgctg
gcgtcgccgcgcatgctgggcaagctggcgctgcccgccgcgcgcctgctggcctgcgat
ggcgacgatacgtggcgccgtggcctgcgcgcggccggcttctcctggcaagaggacggc
gcgccgggctggctggaggcgcgctataccagccgcaagccgcaagcgccgcggccggcc
ccgccggtgcgcagcgccatcgtcatcggcgccggcgtggccggcagcgccgcgtgcgag
cggctgtgcgcgcgcggctgggacgtgaccttgctggaacggcatgccgaaccggccacg
gaggcttccggcaaccgggccggcatcttcatgccgctgctgtcgcgcgacgacaatatc
ccgacccggctgacgcgcgccgccttcctgtacgcgctgcgccattggcggtacctcggt
ggcctgtcgcccgcgggcgagccgatgctgggcgcgcagtgcggcgtgctgcaactggcg
cgcgacgccgaccatgcggccttgcagcgcgaggtggtggaacagtggcgctacccggag
gcgttcgtgcgctggctcgacgccggcaccgccgccggcttgctgggtgccccgaccccg
gacggcgcctggctgttcgcacagggtggctgggccaacccggcctcgatctgccgcgcc
atgctggccgcctgcggcgagcggctgtgccgcatattcagcgccgcggcggtgcggctg
gaacggcgcgacggcctgtggcatgccatcggcgccgatgagacggtgctggccagtgcc
gcccacgccatcgtcgccaacggcgccggcgcgctgaccctggagcagacggccgcgctg
ccgctgtacaccatgcgcggccaggtcacgcacgtcgacgccgccgattttgccgcgctg
ccgctggtggtctgccgcgaagcctacatgacgccaccggtgaacggcatcgtcagcgtg
ggcgcgacctacgacaaggacgacgaacgcgcgctgcgcgccgccagccaggccgagaac
ctggcgcgggcgcgtgagatcctgggcccggcgcgggtgccggacgagctgccgctgcag
ggccgggtaggcctgcgctgcatggcgccggaccggttgccgctggtgggcgcactaccc
gactacgcggcgccggggcggcccgagcggctgcgcgacgtggcgcgcttgccgaacctg
catgccctgctgggctacgcgtcgcgcgggctgatctgggcgccgctggcggccgagctg
ctggccgccatgctggaagacgaacccctgccgctcgaagcgagcctggcggcagcgctg
gacccgggccggtttttgttgaaagagcgcaaacgtcagggccctccgagtgtcgcaagc
gcgccataa
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