Mesocricetus auratus (golden hamster): 101822487
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Entry
101822487 CDS
T08306
Symbol
Polr1a
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101822487 (Polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maua03021
]
101822487 (Polr1a)
Enzymes [BR:
maua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101822487 (Polr1a)
Transcription machinery [BR:
maua03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
101822487 (Polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
101822487
NCBI-ProteinID:
XP_040593830
EnsemblRapid:
ENSMAUG00000008497
LinkDB
All DBs
Position
Unknown
AA seq
1717 aa
AA seq
DB search
MLASKHTPWRRLQGISFGMYSAEELKKLSVKSITNPRYVDSLGNPSANGLYDLALGPADS
KEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAAIHLL
VCQLRVLEVGALQAVYELERILSRFLEETANPSAFEIQEELEEYTSKILQNNLLGSQGAH
VKNVCESRSRLIAYFWKTHMTAKRCPHCKTGRSVVRKEHNSKLIITYPAAVHKKSGQKDA
EPPEGVPAAPGIEEALMGKRGYLTPSSAQEHLFAIWKNEGFFLNYLFSGLDDMGVESSFN
PSMFFLDFIVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDAVLIRKLLALMAQEQKLPC
EVTELITDKENDSSVAIDRSFLSMLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMLEK
YPGIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVT
PWNVQELRQAVINGPNVHPGASMVINEDGSRTALSAVDATQREAVAKQLLTPATGAPKPQ
GTKIVCRHVKNGDILLLNRQPTLHRPSIQAHRAHILPEEKVLRLHYANCKAYNADFDGDE
MNAHFPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTTRGCFFTREQY
MELVYRGLTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDYSPLNLSGKAKIGS
KAWVKETPRPVPDFDPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGET
SGRVLTCLARLFTAYLQLYRGFTLGVEDILVKPDADVKRQRIIEESTQCGPRAVRAALNL
PEAASCDEIQGKWQDAHLGKDQRDFNMIDMKFKEEVNHYSNEINKACMPFGLHRQFPENN
LQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTG
RFLTGIRPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVIQYDLTVRDSDGS
VVQFLYGEDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEVLSRADPQKVLRHFKAIK
KWHSKHSNALLRKGAFLSFSQKIQAAVKALNLQGKNQNGRSPETQQMLQMWYELDEKSRW
KYQKRAAPCPDPSLSVWRPDIFFASVSETFEKKIDDYSQEWAAQEERSYKKSELSLDRLK
TLLQLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILM
VASANIKTPMMSVPVFNTKKALKRVKSLKKQLTRVCLGEVLQKVDVQESFHMGEKQNRSR
VYELRFQFLPHAYYQQEKCLRPEDILHFMETRFFKLLMEAIKKKNSKASAFRSVNSRRAT
QKDLDDAEDSGKSRREEEGDEEEEGNIVDAEAEEGDADASDTKRKEKQEEEVDYESEEEG
EEEADEEDVQEEENIDGEGAHQAHEPGEEEGSALEEEASQNPARRHSRSQGAEAVERRVQ
AVRDAHSFIEDYQYDTEESLWCQVTLKLPLMKIHFDMSSLIVSLAHNAVVYTTKGITRCL
LNETTNSKNEKELVLSTEGINLPEMFKYSEVLDLRRLYSNDIHAMANTYGIEAALRVIEK
EIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIQSSSSPLQQMTFETSFQFLKQ
ATMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgctggcctccaagcacacgccatggaggcggcttcagggcatttccttcggaatgtat
tcggctgaggagctcaagaaattaagtgttaaatccattacaaaccctcgctatgtggac
agcctgggaaacccttcagcaaatggcctgtatgatttggctttgggtcctgcagattcc
aaagaagtgtgctccacctgcgtgcaagacttcagcaactgctcgggacacctgggccac
attgagctcccgctcacagtgtacaaccctctgctctttgataaactctacctcttgctc
cgaggctcctgtttaaattgccacatgctgacttgtcctcgggctgccattcacctgttg
gtctgccagctgagggtcttggaagttggagccctacaagcagtctatgaacttgagcgg
attctgagcaggtttctggaagaaactgctaatccttccgccttcgaaattcaagaagag
ttagaagagtacacaagcaaaattctgcagaacaacctcttggggtcccaaggtgcacat
gtgaaaaatgtctgtgaaagcaggagcagactcattgcttacttctggaagacacatatg
accgctaagcgatgtccccactgcaagaccggacggtcagtggttcgaaaggaacacaac
agtaagctgataatcacatatccagccgcagtgcacaaaaagtctggccagaaggatgca
gagcccccagaaggagtaccagcagctccaggaattgaagaagctctgatggggaagcga
gggtacctgacacctagcagcgcccaagagcatctttttgccatttggaagaatgaagga
ttcttcctgaattaccttttttctggattggatgatatgggcgtggagtctagtttcaac
cccagtatgttctttctagatttcatagtggtgccgccctccaggtatcgtcctgtcaat
cgcctgggggaccagatgtttactaatggccagacagtgaacttacaggctgtaatgaag
gatgcagttttgatccggaaacttctggcattgatggcccaagaacagaagctgccctgt
gaggtgacagaactcatcacagacaaggaaaatgactcttcagttgctatcgaccgatcc
tttttaagtatgcttccaggccagtctctcacagataaactttacaacatttggattcgc
cttcagagccatgtcaatattgtgtttgacagtgagatggacaaattaatgttggaaaag
taccctggcataagacagatcctagagaagaaggaaggcctgttccggaagcacatgatg
ggaaaacgagtcgactatgcagcccgctcagtcatctgcccagacatgtacatcaatacc
aatgagattggaattcccatggtatttgccacaaaactcacctaccctcagccagttacc
ccatggaacgtgcaggaactaagacaagcagtcatcaatggacccaacgtgcacccagga
gcctccatggtcatcaatgaggacggcagtcgcacagccctgagtgcagtggacgctacc
caacgggaagctgtggccaaacagctcctgacaccagccacaggggctcctaagcctcag
gggacaaaaattgtgtgccggcatgtgaagaatggggacattctcctgctgaatcggcag
cccaccttgcacagaccctccatccaggcccaccgtgcccacattctgcctgaagaaaaa
gtcctacgccttcactatgccaactgcaaagcctacaatgctgactttgatggggacgag
atgaatgcccacttcccccagagcgagttgggccgagctgaagcctatgtcctggcctgc
actgatcagcagtatcttgttcccaaggatggccagccattggcgggattgattcaagat
cacatggtttcaggtgcaaacatgaccactcggggatgctttttcacccgggaacagtac
atggagctggtataccgagggctcacagacaaagtgggacgggtgaaactctttcctccg
gccatcctgaagcccttcccactgtggacaggaaagcaggttgtgtcaacccttctcata
aacataatcccagaggactacagccccctgaatttatcgggaaaggcaaaaatcggcagt
aaagcctgggtgaaggaaactccacggcctgtccctgactttgaccctgactccatgtgt
gagtcccaggtgatcatcagggaaggggagcttctctgcggagtgctggacaaggcccac
tacgggagctctgcctatggcctggtccactgctgctatgagatctatgggggcgagacc
agcggcagggttctcacttgcctagcccgcctcttcactgcctacctgcagctctataga
ggtttcaccttgggtgtagaagacattttggttaagccagatgcagatgtaaagagacag
cgcatcattgaagaatctacccagtgtgggccccgggctgtcagggctgcgttgaacctg
ccagaagctgcatcatgtgatgagatccaagggaaatggcaggatgcccatctgggcaaa
gaccagagggattttaacatgattgatatgaagttcaaggaggaagtgaaccactacagc
aatgagatcaacaaggcatgtatgcctttcggcttgcacagacagttccccgagaacaac
ctgcaaatgatggtgcagtcaggagccaaagggtcaaccgtgaacacgatgcaaatctct
tgcctgctgggccagattgagttggaaggtcggagacccccgctgatggcatctggcaag
tcactgccctgctttgagccttacgagttcacacctagggctggtggcttcgtcactgga
aggttccttactggcatcaggcctcccgagttcttctttcactgcatggcgggacgagaa
ggcctggtggacaccgctgtcaaaaccagccggtctggctatctccaaaggtgcatcatc
aagcacctggaggggctggtcatccagtatgatctgacagtccgagatagcgacggcagc
gtggtacagttcctgtacggggaggatggcctggacatccccaagacacagttcctgcag
cccaagcagttccccttcctggccagcaactatgaggtgataatgaaatccaagcatctc
catgaagttttgtccagagcagatccccagaaagtgctccgccacttcaaagccattaaa
aaatggcatagcaagcattccaatgcactgctgagaaaaggcgccttcctgagtttctcc
cagaagattcaggcagctgtgaaagccttgaacctacagggcaagaaccagaatggtcgc
agcccagaaacccagcagatgttacagatgtggtatgaattagatgagaagagccgatgg
aaataccagaagagggccgctccttgtcctgaccctagcctgtctgtgtggcgcccagac
atcttctttgcatctgtgtctgaaacatttgaaaaaaagattgatgactacagtcaggag
tgggcagcccaagaagagaggagttacaagaaatcagagctttctctcgacaggctgaaa
accttactgcagctcaagtggcagcgctcactgtgtgacccaggggaggctgttggccta
ctggccgcccagagcatcggggagccctccacacagatgacactgaacaccttccacttt
gcaggcagaggcgaaatgaacgtcaccctgggtattccaagactgagggagattcttatg
gtggccagtgccaacatcaagacacccatgatgagcgtgcctgtgtttaataccaagaaa
gcattgaagagagtcaagagcctaaagaagcagcttaccagggtgtgcctgggggaggta
ttgcagaaagttgacgtccaagagtctttccatatgggagaaaaacagaacagatcccgg
gtctatgagctccggtttcagttcctgccacatgcatattaccagcaggaaaagtgcctg
agacctgaggacatcttacacttcatggaaaccaggtttttcaaactactaatggaagcc
atcaaaaagaagaatagcaaagcatcagccttcagaagtgtgaatagtagaagagctaca
cagaaggaccttgatgacgcggaggactcgggcaagagtcggagagaggaagaaggggat
gaagaagaggaggggaacattgtggatgctgaagccgaggagggggatgcagatgcttct
gacaccaaacgcaaggagaagcaagaggaagaggtcgactatgagagtgaggaagaaggg
gaggaggaggcagacgaggaggatgtacaggaggaagagaacattgatggtgaaggtgcc
caccaggcccacgagccgggtgaggaagagggctccgccctggaggaggaggcatcccag
aaccctgcccgccggcactccaggagccagggagccgaggcggtggaacgccgggtccag
gctgtacgggacgcccactcgttcattgaggactaccagtatgacacagaggagagcctg
tggtgccaggtgactctgaagctcccactgatgaagattcattttgacatgagctccttg
attgtgtccttggcccacaatgccgttgtctatacaaccaagggcatcactcggtgcctt
ctgaatgaaacgaccaacagtaagaatgaaaaggagcttgtgctgagcacagagggaatc
aacctccccgagatgtttaagtactccgaggtgctggacctgcgccgcctctactccaac
gacatccacgccatggccaacacttatggcattgaggccgccctgcgggttattgagaag
gagattaaggatgtgtttgctgtgtatggcattgcagttgatcctcgccatctctctctg
gtcgctgattatatgtgctttgagggtgtttataagccactcaatcgctttgggatccag
tcgagttcctcccctttgcagcagatgacatttgaaaccagcttccagtttctcaaacag
gccaccatgatgggatcccatgatgagctgaagtcaccctcagcctgtctcgtggtgggg
aaagtcgtcaaaggcgggacaggcctatttgagctcaagcagcccctaagatag
DBGET
integrated database retrieval system
