Mycobacterium avium subsp. paratuberculosis E93: RE97_12575
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Entry
RE97_12575 CDS
T03847
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mavu
Mycobacterium avium subsp. paratuberculosis E93
Pathway
mavu03030
DNA replication
mavu03410
Base excision repair
mavu03420
Nucleotide excision repair
mavu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mavu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RE97_12575
03410 Base excision repair
RE97_12575
03420 Nucleotide excision repair
RE97_12575
03440 Homologous recombination
RE97_12575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mavu03032
]
RE97_12575
03400 DNA repair and recombination proteins [BR:
mavu03400
]
RE97_12575
Enzymes [BR:
mavu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RE97_12575
DNA replication proteins [BR:
mavu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RE97_12575
DNA repair and recombination proteins [BR:
mavu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RE97_12575
NER (nucleotide excision repair)
GGR (global genome repair) factors
RE97_12575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
DNA_pol_lambd_f
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AJK79934
LinkDB
All DBs
Position
complement(2768036..2770786)
Genome browser
AA seq
916 aa
AA seq
DB search
MRAVPATKAATKTATKTAAGAGEEQNRPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTN
AVYGFTAMLINLLRDEAPTHIAAAFDVSRQTFRSDRYPEYKANRSATPDEFHGQIDITKE
VLAALGITVLAEPGFEADDLIATLATQAENEGYRVLVVTGDRDSLQLVSDNVTVLYPRKG
VSELTRFTPEAVVEKYGLTPQQYPDFAALRGDPSDNLPGIPGVGEKTASKWIAEYGSLQA
LVDNVDSVRGKVGDALREHLASVIRNRELTDLIKDVPLAQTPDTLRLQPWDRDQIHRLFD
DLEFRMLRDRLFETLAAVEPEVDEGFDVRGGALEAGELAVWLAEHSSGKRFGLAVAGTHL
AYDADCTALAIVSADGEGRYIDTSALDPDDEAALASWLADPGPPKALHEAKLAMHDLAGR
GWTLAGVTSDTALAAYLVRPGQRSFSLDDLALRYLRRELRAENPQQQQLSLLDDTDGTDD
QAVQTLILRAVAVLDLADALDEELARINSTSLLSGMELPVQRVLAGMENAGIAVDLDLLS
ELQSDFAHQIRDAAEAAYAVIGKQINLGSPKQLQAVLFDELQMPKTKRTKTGYTTDADAL
QSLFDKTGHPFLQHLLAHRDATRLKVTVDGLLNSVASDGRIHTTFNQTIAATGRLSSTEP
NLQNIPIRTEAGRRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSQDAGLIEAFNTGEDL
HSFVASRAFGVPIEEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEAKEQMDAYFA
RFGGVRDYLHAVVEQARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAA
DIIKVAMIEVDKAIKEAGLRSRILLQVHDELLFEVAAGEREQLEALARDKMGGAYPLDVP
LEVSVGYGRSWDAAAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
gtgagagccgtgcccgccacgaaagccgcgacgaaaaccgccaccaaaaccgccgccggg
gccggcgaggaacaaaaccggccgacactgatgctgctggacggcaactcgctggcgttc
cgggcgttctatgcgctgcccgccgagaacttcaagacccgcggcgggctgaccaccaac
gcggtctacggcttcaccgcgatgctgatcaacctgctgcgcgacgaggccccgacccac
atcgccgcggccttcgacgtgtcccggcagaccttccgctccgatcgctacccggaatac
aaggccaaccgctcggcgacccccgacgagttccacggccagatcgacatcaccaaggaa
gtcctggcggcgctgggcatcacggtgctcgccgagccgggattcgaggccgacgacctg
atcgccaccctggccacccaggccgagaacgagggctaccgggtgctggtggtcaccggc
gaccgcgactcgctgcagttggtcagcgacaacgtgacggtgctctacccgcgcaagggc
gtcagcgagctgacccgcttcacccccgaggcggtcgtcgaaaaatacgggctgaccccc
cagcagtaccccgacttcgccgccctgcgcggcgaccccagcgacaacctgcccggcatt
cccggtgtgggggagaagaccgcctccaagtggatcgccgaatacgggtcgctgcaggcg
ctggtcgacaacgtcgactcggtacgcggcaaggtcggcgacgcgctgcgcgaacacctg
gccagcgtgatccgcaaccgcgagctgaccgatctgatcaaggacgtgccgctggcccag
acgcccgacacgctgcggctgcagccctgggaccgcgaccagatccaccggctcttcgac
gacctggagttccggatgctgcgcgaccggctgttcgaaaccctggccgcggtggagcct
gaggtcgacgagggtttcgacgtgcgtggcggcgcgctggaagccggcgaactggcggtg
tggttggccgagcacagctccggcaagcgcttcgggctggccgtcgccggcacccacctg
gcctacgatgccgactgcaccgcgctggccatcgtctccgccgacggcgagggccgctac
atcgacacctcggcgctggatcccgacgacgaagccgcgctggcgtcctggttggccgac
cccggtccgcccaaggcgctgcacgaggccaagctggcgatgcacgacctggccgggcgg
ggctggacgctggccggcgtcacctccgacaccgcgctggccgcctatctggtgcggccc
ggtcagcgcagcttctccctcgacgatctcgcactgcgctatctgcgccgcgagctgcgc
gcggaaaaccctcagcagcaacagctttcgctgctggatgacaccgacggcaccgacgac
caggcggtgcagacgctgatcctgcgggcggtggcggtgctggatctggccgacgcgctc
gacgaggaactggcccgcatcaactccacctcgctgttgagcggcatggagctgccggtg
cagcgggtgctcgccggaatggaaaacgccggtatcgcagtcgatttggacttgctcagc
gagttgcagagcgatttcgcccaccagatccgcgacgcggccgaggcggcgtacgcggtg
atcggcaagcagatcaacctcggctcgccaaaacagttgcaggcggtgctctttgacgag
cttcagatgccgaagaccaaacgcaccaagaccggctacaccaccgacgcggatgccctg
cagtcgctgttcgacaagaccggccacccgttcctgcagcatctgctggcccaccgggac
gccacccggctcaaggtcaccgtcgacgggctgctcaactcggtggcctccgacgggcgc
atccacaccaccttcaaccaaaccatcgcggcgacgggccgattgtcgtcgaccgagccg
aacctgcagaacattccgatccgcaccgaggcgggccggcggatccgcgacgcgttcgtg
gtcggcgacggttatgccgagctgatgaccgccgactacagccagatcgagatgcggatc
atggcccacctgtcccaggacgccgggctgatcgaagccttcaacacgggggaggacctg
cactcgttcgtggcctcccgcgccttcggggtgcccatcgaggaggtcaccggcgagctg
cgccgccgggtcaaggccatgtcctacgggctggcctacgggctgagcgcctacgggctg
tcgcaacagctcaagatctccaccgaggaggccaaggagcagatggacgcctacttcgcc
cggttcggcggggtgcgcgactacctgcacgccgtcgtcgaacaggcccgcaaggacggc
tacacctcgacggtgctgggccgccgccggtacctgcccgagctcgacagcagcaaccgg
caggtgcgcgaagccgccgagcgggcggcgctgaatgcgcccatccagggcagcgccgcc
gacatcatcaaggtggccatgatcgaggtcgacaaggcgatcaaggaggcgggcctgcgg
tcgcggatcctgttgcaggtgcacgacgagctgctcttcgaggtcgcggccggcgagcgg
gagcagctggaggcgctggcccgcgacaagatgggcggcgcctacccgctcgacgtcccg
ctggaggtgtccgtgggctacggccgcagctgggacgctgcggcgcattga
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